RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 TLR2O60603 784 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 SEC22BO75396 215 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 ONECUT2O95948 504 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 LYL1P12980 280 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 SERPINA4P29622 427 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 MECOMQ03112 1051 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 TMEM115Q12893 351 aaPredicted RBP3.51□□□□□ -1.85
SMC6-208ENST00000481708 PCLAFQ15004 111 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 SEC23BQ15437 767 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 ZNF667Q5HYK9 610 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 ISM2Q6H9L7 571 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 RNF111Q6ZNA4 994 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 C1orf186Q6ZWK4 172 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 PPP1R42Q7Z4L9 355 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 CCDC91Q7Z6B0 441 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 SCN4BQ8IWT1 228 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 TRIM44Q96DX7 344 aaPredicted RBP3.51□□□□□ -1.85
SMC6-208ENST00000481708 C1orf74Q96LT6 269 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 SYNCQ9H7C4 482 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 TLR9Q9NR96 1032 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 HPF1Q9NWY4 346 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 TFCP2L1Q9NZI6 479 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 VPS51Q9UID3 782 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 AGTPBP1Q9UPW5 1226 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 FPGT-TNNI3KV9GXZ4 949 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 ABCC4O15439 1325 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 CCDC69A6NI79 296 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 DDX39AO00148 427 aaKnown RBP3.51□□□□□ -1.85
SMC6-208ENST00000481708 ADAMDEC1O15204 470 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 PHF2O75151 1096 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 MPOP05164 745 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 SRGAP2BP0DMP2 458 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 NTSR1P30989 418 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 GJA4P35212 333 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 PGM1P36871 562 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 GPC3P51654 580 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 IL13RA1P78552 427 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 EGR3Q06889 387 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 DUSP8Q13202 625 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 TNFAIP1Q13829 316 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 RSPO4Q2I0M5 234 aaPredicted RBP3.51□□□□□ -1.85
SMC6-208ENST00000481708 MTHFSDQ2M296 383 aaKnown RBP3.51□□□□□ -1.85
SMC6-208ENST00000481708 RINT1Q6NUQ1 792 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 KBTBD6Q86V97 674 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 RNF169Q8NCN4 708 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 NETO1Q8TDF5 533 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 DENND1AQ8TEH3 1009 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 DUSP19Q8WTR2 217 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 CARD11Q9BXL7 1154 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 FUT8Q9BYC5 575 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 RANBP17Q9H2T7 1088 aaKnown RBP3.51□□□□□ -1.85
SMC6-208ENST00000481708 TSPY26PQ9H489 355 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 THAP9Q9H5L6 903 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMC6-208ENST00000481708 SUCLA2Q9P2R7 463 aaPredicted RBP3.51□□□□□ -1.85
SMC6-208ENST00000481708 RASAL2Q9UJF2 1139 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 MKLN1Q9UL63 735 aa3.51□□□□□ -1.85
SMC6-208ENST00000481708 TRBV23OR9-2A0A075B6M9 112 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 A0A0G2JLW4 131 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 KRT87PA6NCN2 255 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 MBD3L4A6NDZ8 208 aaPredicted RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 MBD3L3A6NE82 208 aaPredicted RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 VWA5AO00534 786 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 DCLK1O15075 740 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 GRM6O15303 877 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 CYP26A1O43174 497 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 TSPAN3O60637 253 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 KLHL41O60662 606 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 RASSF9O75901 435 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 METTL18O95568 372 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 IL18BPO95998 194 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 URODP06132 367 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 GLI4P10075 376 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 RPL10P27635 214 aaKnown RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 HTR7P34969 479 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 NSUN2Q08J23 767 aaKnown RBP eCLIP3.5□□□□□ -1.85
SMC6-208ENST00000481708 TYSND1Q2T9J0 566 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 RAB41Q5JT25 222 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 METTL24Q5JXM2 366 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 GKAP1Q5VSY0 366 aaPredicted RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 USP51Q70EK9 711 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 AOPEPQ8N6M6 819 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 DEPDC1BQ8WUY9 529 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 TBC1D5Q92609 795 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 SPSB4Q96A44 273 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 FIZ1Q96SL8 496 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 HEMGNQ9BXL5 484 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 A1CFQ9NQ94 594 aaKnown RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 SNTG1Q9NSN8 517 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 RNF186Q9NXI6 227 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 RPTORQ8N122 1335 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 FNDC1Q4ZHG4 1894 aaPredicted RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 SLC38A8A6NNN8 435 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 FADS2P1A8MWK0 482 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 SNAP23O00161 211 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 DNM1LO00429 736 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 ASAP2O43150 1006 aa3.5□□□□□ -1.85
SMC6-208ENST00000481708 RRP9O43818 475 aaKnown RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 SLU7O95391 586 aaKnown RBP3.5□□□□□ -1.85
SMC6-208ENST00000481708 LRG1P02750 347 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms