RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 WDR60Q8WVS4 1066 aa14.39□□□□□ -0.11
PHF3-204ENST00000481385 CSNK1G1Q9HCP0 422 aa14.39□□□□□ -0.11
PHF3-204ENST00000481385 CASS4Q9NQ75 786 aa14.39□□□□□ -0.11
PHF3-204ENST00000481385 SHROOM3Q8TF72 1996 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 CCDC78A2IDD5 438 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 ATP9BO43861 1147 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 GLRA3O75311 464 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 CDC25CP30307 473 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 CD52P31358 61 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 ELF1P32519 619 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 ZNF157P51786 506 aaPredicted RBP14.38□□□□□ -0.11
PHF3-204ENST00000481385 GALNT2Q10471 571 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 TUBB3Q13509 450 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 TMEM135Q86UB9 458 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 CCNJLQ8IV13 435 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 TNS4Q8IZW8 715 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 DNAAF3Q8N9W5 541 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 ACMSDQ8TDX5 336 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 FERMT1Q9BQL6 677 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 GBA3Q9H227 469 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 CHRAC1Q9NRG0 131 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 SNX15Q9NRS6 342 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 THAP1Q9NVV9 213 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 DNAJC16Q9Y2G8 782 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 PTCH2Q9Y6C5 1203 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 SCN10AQ9Y5Y9 1956 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 TNPO2O14787 897 aaKnown RBP14.38□□□□□ -0.11
PHF3-204ENST00000481385 HNRNPCL1O60812 293 aaKnown RBP14.38□□□□□ -0.11
PHF3-204ENST00000481385 CAPN15O75808 1086 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 HCAR3P49019 387 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 AIF1P55008 147 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 IRF9Q00978 393 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 RCN2Q14257 317 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 KPNB1Q14974 876 aaKnown RBP14.38□□□□□ -0.11
PHF3-204ENST00000481385 HSP90AA5PQ58FG0 334 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 SPANXN3Q5MJ09 141 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 WASHC2DQ5SRD0 308 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 FAM91A1Q658Y4 838 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 OTOP3Q7RTS5 596 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 STRA8Q7Z7C7 330 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 RAB3IL1Q8TBN0 382 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 HDAC11Q96DB2 347 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 SORT1Q99523 831 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 CCDC106Q9BWC9 280 aa14.38□□□□□ -0.11
PHF3-204ENST00000481385 OXCT2Q9BYC2 517 aaPredicted RBP14.38□□□□□ -0.11
PHF3-204ENST00000481385 PRR5-ARHGAP8B1AHC4 643 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 DUSP11O75319 330 aaKnown RBP14.37□□□□□ -0.11
PHF3-204ENST00000481385 B3GAT3O94766 335 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 TYK2P29597 1187 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 GP5P40197 560 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 SLC1A6P48664 564 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 ARHGAP8P85298 464 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 TRIM32Q13049 653 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 ANKRD20A4Q4UJ75 823 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 ACSBG2Q5FVE4 666 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 STXBP5Q5T5C0 1151 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 FSTL4Q6MZW2 842 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 CNTD1Q8N815 330 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 ENDOVQ8N8Q3 282 aaKnown RBP14.37□□□□□ -0.11
PHF3-204ENST00000481385 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.37□□□□□ -0.11
PHF3-204ENST00000481385 GIMAP7Q8NHV1 300 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 DQX1Q8TE96 717 aaKnown RBP14.37□□□□□ -0.11
PHF3-204ENST00000481385 USP33Q8TEY7 942 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 PKMYT1Q99640 499 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 RBBP8Q99708 897 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 MTG1Q9BT17 334 aaPredicted RBP14.37□□□□□ -0.11
PHF3-204ENST00000481385 NAT9Q9BTE0 207 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 ARHGAP39Q9C0H5 1083 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 LRRC40Q9H9A6 602 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.37□□□□□ -0.11
PHF3-204ENST00000481385 COL4A4P53420 1690 aaPredicted RBP14.37□□□□□ -0.11
PHF3-204ENST00000481385 JCHAINP01591 159 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 SRGAP2BP0DMP2 458 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 KDSRQ06136 332 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 ARTNQ5T4W7 220 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 PM20D1Q6GTS8 502 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 FAM171BQ6P995 826 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 SERINC5Q86VE9 423 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 TEX9Q8N6V9 391 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 GPATCH11Q8N954 259 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 RBM15BQ8NDT2 890 aaKnown RBP14.37□□□□□ -0.11
PHF3-204ENST00000481385 PPP1R14CQ8TAE6 165 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 SHKBP1Q8TBC3 707 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 WWP1Q9H0M0 922 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 PNPOQ9NVS9 261 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 PADI3Q9ULW8 664 aa14.37□□□□□ -0.11
PHF3-204ENST00000481385 MAGEA12P43365 314 aa14.36□□□□□ -0.11
PHF3-204ENST00000481385 CCNG1P51959 295 aa14.36□□□□□ -0.11
PHF3-204ENST00000481385 ARL13BQ3SXY8 428 aa14.36□□□□□ -0.11
PHF3-204ENST00000481385 SPATA22Q8NHS9 363 aa14.36□□□□□ -0.11
PHF3-204ENST00000481385 MOCOSQ96EN8 888 aa14.36□□□□□ -0.11
PHF3-204ENST00000481385 CPNE1Q99829 537 aa14.36□□□□□ -0.11
PHF3-204ENST00000481385 COPG2Q9UBF2 871 aa14.36□□□□□ -0.11
PHF3-204ENST00000481385 DCDC2Q9UHG0 476 aa14.36□□□□□ -0.11
PHF3-204ENST00000481385 GIT1Q9Y2X7 761 aa14.36□□□□□ -0.11
PHF3-204ENST00000481385 B2RBV5 119 aa14.36□□□□□ -0.11
PHF3-204ENST00000481385 NMBRP28336 390 aa14.36□□□□□ -0.11
PHF3-204ENST00000481385 NAB1Q13506 487 aa14.36□□□□□ -0.11
PHF3-204ENST00000481385 INTS6LQ5JSJ4 861 aaKnown RBP14.36□□□□□ -0.11
PHF3-204ENST00000481385 VWA5B1Q5TIE3 1220 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms