RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 ZNF767PQ75MW2 155 aa10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 RALYLQ86SE5 291 aaKnown RBP10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 PRPF39Q86UA1 669 aaKnown RBP10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 CCDC60Q8IWA6 550 aaPredicted RBP10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 PALM2Q8IXS6 379 aa10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 FNDC5Q8NAU1 212 aa10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 GRIN3AQ8TCU5 1115 aa10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 C11orf24Q96F05 449 aaPredicted RBP10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 EDC3Q96F86 508 aaKnown RBP10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 PAWRQ96IZ0 340 aaKnown RBP10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 ARL5BQ96KC2 179 aa10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 TSGA13Q96PP4 275 aa10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 FBXO28Q9NVF7 368 aa10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 ADPRHL2Q9NX46 363 aa10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 DTX4Q9Y2E6 619 aa10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 KCNE2Q9Y6J6 123 aa10.58□□□□□ -0.72
PRPF4B-206ENST00000481109 LRRC37A3O60309 1634 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 CTDSP2O14595 271 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 GREM1O60565 184 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 DAB1O75553 588 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 MICAL2O94851 1124 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 STAU1O95793 577 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 PTTG1O95997 202 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 EEF1DP29692 281 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 IL6STP40189 918 aaPredicted RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 EIF3EP60228 445 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 EIF4A1P60842 406 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 ATP2C1P98194 919 aaPredicted RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 PMS2P3Q13401 168 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 ASIC2Q16515 512 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 GARNL3Q5VVW2 1013 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 DCUN1D2Q6PH85 259 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 ALYREFQ86V81 257 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 TAGAPQ8N103 731 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 MFSD4AQ8N468 514 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 PNPT1Q8TCS8 783 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 ALKBH8Q96BT7 664 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 ARHGEF26Q96DR7 871 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 PDXPQ96GD0 296 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 CCDC120Q96HB5 630 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 NXF1Q9UBU9 619 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 BAG5Q9UL15 447 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 PA2G4Q9UQ80 394 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 C10orf71Q711Q0 1435 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 ZNF487B1APH4 448 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 SORBS3O60504 671 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 NOL4O94818 638 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 CPNE6O95741 557 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 GOT2P00505 430 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 SLC2A3P11169 496 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 GYS1P13807 737 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 SYN1P17600 705 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 COILP38432 576 aaPredicted RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 PRKAA2P54646 552 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 KRR1Q13601 381 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 RFTN1Q14699 578 aaPredicted RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 PON2Q15165 354 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 CCNG2Q16589 344 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 FUT11Q495W5 492 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 GRTP1Q5TC63 336 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 ALKBH5Q6P6C2 394 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 HORMAD1Q86X24 394 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 NT5DC4Q86YG4 428 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 EID3Q8N140 333 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 OR13F1Q8NGS4 319 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 BEGAINQ9BUH8 593 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 C20orf96Q9NUD7 363 aaPredicted RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 PIH1D1Q9NWS0 290 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 BABAM1Q9NWV8 329 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 B3GNT2Q9NY97 397 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 GLTPQ9NZD2 209 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 PPARGC1AQ9UBK2 798 aaKnown RBP10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 TINAGQ9UJW2 476 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 STOML2Q9UJZ1 356 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 NAGPAQ9UK23 515 aa10.57□□□□□ -0.72
PRPF4B-206ENST00000481109 NCANO14594 1321 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 A0A0G2JLW4 131 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 PRSS51A0A1B0GVH4 220 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 PRAMEF22A3QJZ6 481 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 ANKRD63C9JTQ0 380 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 H3BMM5 538 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 MEN1O00255 615 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 LAD1O00515 517 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 USP12O75317 370 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 POP4O95707 220 aaKnown RBP10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 CSF1RP07333 972 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 SELLP14151 372 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 F8A1P23610 371 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 ARNTP27540 789 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 CDH15P55291 814 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 ILF2Q12905 390 aaKnown RBP10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 BFSP1Q12934 665 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 RIN1Q13671 783 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 BEND4Q6ZU67 534 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 TSPYL5Q86VY4 417 aaPredicted RBP10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 KLHL6Q8WZ60 621 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 POMGNT1Q8WZA1 660 aa10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 AHCYL2Q96HN2 611 aaKnown RBP10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 NAP1L4Q99733 375 aaKnown RBP10.56□□□□□ -0.72
PRPF4B-206ENST00000481109 TMEM121Q9BTD3 319 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms