RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 RBAKQ9NYW8 714 aaPredicted RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 KLHL3Q9UH77 587 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 NARFQ9UHQ1 456 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 PRR12Q9ULL5 1215 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 CORINQ9Y5Q5 1042 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 GOLGA8QA0A0J9YX86 632 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 BCLAF3A2AJT9 711 aaKnown RBP10.87□□□□□ -0.67
SIK3-210ENST00000480468 DYTNA2CJ06 578 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 GOLGA8OA6NCC3 632 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 KPNA7A9QM74 516 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 GOLGA8NF8WBI6 632 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 J3QRK9 145 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 HNRNPDLO14979 420 aaKnown RBP10.87□□□□□ -0.67
SIK3-210ENST00000480468 UFL1O94874 794 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 APRTP07741 180 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 HSPA1AP0DMV8 641 aaKnown RBP10.87□□□□□ -0.67
SIK3-210ENST00000480468 HSPA1BP0DMV9 641 aaKnown RBP10.87□□□□□ -0.67
SIK3-210ENST00000480468 CCNA2P20248 432 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 IREB2P48200 963 aaKnown RBP10.87□□□□□ -0.67
SIK3-210ENST00000480468 PCYT1AP49585 367 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 ARPC4P59998 168 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 ITGADQ13349 1161 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 KCNJ8Q15842 424 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 TMEM214Q6NUQ4 689 aaKnown RBP10.87□□□□□ -0.67
SIK3-210ENST00000480468 TMEM26Q6ZUK4 368 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 TMEM179Q6ZVK1 233 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 CHSY3Q70JA7 882 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 ILDR2Q71H61 639 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 IGFN1Q86VF2 1251 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 ZFPM1Q8IX07 1006 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 CDKL2Q92772 493 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 PBXIP1Q96AQ6 731 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 SLCO4A1Q96BD0 722 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 FBXL8Q96CD0 374 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 ZNF347Q96SE7 839 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 TCF12Q99081 682 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 ILKAPQ9H0C8 392 aaPredicted RBP10.87□□□□□ -0.67
SIK3-210ENST00000480468 ADAMTS10Q9H324 1103 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 BTG4Q9NY30 223 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 TMEM216Q9P0N5 145 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 SYNPO2Q9UMS6 1093 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 NUB1Q9Y5A7 615 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 TANC1Q9C0D5 1861 aa10.87□□□□□ -0.67
SIK3-210ENST00000480468 SLCO1B7G3V0H7 640 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 RSL1D1O76021 490 aaKnown RBP10.86□□□□□ -0.67
SIK3-210ENST00000480468 CSPG5O95196 566 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 CPNE6O95741 557 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 TRUB2O95900 331 aaKnown RBP10.86□□□□□ -0.67
SIK3-210ENST00000480468 CD1EP15812 388 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 MAGEA12P43365 314 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 ATP6V0D1P61421 351 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 CD300CQ08708 224 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 HMBOX1Q6NT76 420 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 LINC00299Q6ZSB3 139 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 CAMK1DQ8IU85 385 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 HERC6Q8IVU3 1022 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 KIAA0319LQ8IZA0 1049 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 UNC5BQ8IZJ1 945 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 WDTC1Q8N5D0 677 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 RNF148Q8N7C7 305 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 SLC7A14Q8TBB6 771 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 FAM84AQ96KN4 292 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 ALPK1Q96QP1 1244 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 CIB1Q99828 191 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 KIFC3Q9BVG8 833 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 UNC93B1Q9H1C4 597 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 GPN2Q9H9Y4 310 aaPredicted RBP10.86□□□□□ -0.67
SIK3-210ENST00000480468 MRGBPQ9NV56 204 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 VTI1BQ9UEU0 232 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 GGA1Q9UJY5 639 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 SARDHQ9UL12 918 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 SNX13Q9Y5W8 968 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 CNTNAP4Q9C0A0 1308 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 CROCCQ5TZA2 2017 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 TCAF2A6NFQ2 919 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 STX16-NPEPL1H3BU86 382 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 DDX39AO00148 427 aaKnown RBP10.86□□□□□ -0.67
SIK3-210ENST00000480468 KCNN4O15554 427 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 BCL10O95999 233 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 TKTP29401 623 aaKnown RBP10.86□□□□□ -0.67
SIK3-210ENST00000480468 PSMC1P62191 440 aaKnown RBP10.86□□□□□ -0.67
SIK3-210ENST00000480468 UBXN2AP68543 259 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 PRKCQQ04759 706 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 TUBA3CQ13748 450 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 SEL1L3Q68CR1 1132 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 LMBRD2Q68DH5 695 aaPredicted RBP10.86□□□□□ -0.67
SIK3-210ENST00000480468 GPAT2Q6NUI2 795 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 NPNTQ6UXI9 565 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 SLC7A5P1Q8MH63 180 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 OR13F1Q8NGS4 319 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 ADI1Q9BV57 179 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 CALN1Q9BXU9 219 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 POLR1BQ9H9Y6 1135 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 ARMC1Q9NVT9 282 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 SMOXQ9NWM0 555 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 GPRC5DQ9NZD1 345 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 NXF1Q9UBU9 619 aaKnown RBP10.86□□□□□ -0.67
SIK3-210ENST00000480468 ADAM28Q9UKQ2 775 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 CNOT6Q9ULM6 557 aaKnown RBP10.86□□□□□ -0.67
SIK3-210ENST00000480468 IFT52Q9Y366 437 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms