RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 USP27XA6NNY8 438 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 CREB3O43889 395 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 PALMO75781 387 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 EGFP01133 1207 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 CYBBP04839 570 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 CHRNB1P11230 501 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 TARSP26639 723 aaKnown RBP12.59□□□□□ -0.39
TRA2B-212ENST00000480461 CD70P32970 193 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 SSR1P43307 286 aaKnown RBP12.59□□□□□ -0.39
TRA2B-212ENST00000480461 MARCKSL1P49006 195 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 NUMBP49757 651 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 AIF1P55008 147 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 MMRN1Q13201 1228 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 MTA1Q13330 715 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 DPYSL2Q16555 572 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 GEN1Q17RS7 908 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 EFHC2Q5JST6 749 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 C11orf63Q6NUN7 778 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 TSSK4Q6SA08 328 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 ZNF852Q6ZMS4 543 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 POLNQ7Z5Q5 900 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 PSTKQ8IV42 348 aaKnown RBP12.59□□□□□ -0.39
TRA2B-212ENST00000480461 CARNMT1Q8N4J0 409 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 RNF10Q8N5U6 811 aaKnown RBP12.59□□□□□ -0.39
TRA2B-212ENST00000480461 HJURPQ8NCD3 748 aaPredicted RBP12.59□□□□□ -0.39
TRA2B-212ENST00000480461 NETO1Q8TDF5 533 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 TEKT4Q8WW24 435 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 KRT35Q92764 455 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 PNKPQ96T60 521 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 NCAPGQ9BPX3 1015 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 KLC2Q9H0B6 622 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 NOL6Q9H6R4 1146 aaKnown RBP12.59□□□□□ -0.39
TRA2B-212ENST00000480461 PCDH18Q9HCL0 1135 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 RBM12Q9NTZ6 932 aaKnown RBP12.59□□□□□ -0.39
TRA2B-212ENST00000480461 KLHL11Q9NVR0 708 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 DEC1Q9P2X7 70 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 PPARGC1AQ9UBK2 798 aaKnown RBP12.59□□□□□ -0.39
TRA2B-212ENST00000480461 GMEB2Q9UKD1 530 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 NDRG2Q9UN36 371 aaKnown RBP12.59□□□□□ -0.39
TRA2B-212ENST00000480461 TBC1D30Q9Y2I9 924 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 MFHAS1Q9Y4C4 1052 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 OR51B4Q9Y5P0 310 aa12.59□□□□□ -0.39
TRA2B-212ENST00000480461 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.59□□□□□ -0.39
TRA2B-212ENST00000480461 F5P12259 2224 aa12.58□□□□□ -0.39
TRA2B-212ENST00000480461 SLC30A4O14863 429 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 LUC7L3O95232 432 aaKnown RBP12.58□□□□□ -0.4
TRA2B-212ENST00000480461 KAT7O95251 611 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 TNNT1P13805 278 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 GOT1P17174 413 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 MZF1P28698 734 aaPredicted RBP12.58□□□□□ -0.4
TRA2B-212ENST00000480461 HOXC13P31276 330 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 GJC1P36383 396 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 EIF2DP41214 584 aaKnown RBP12.58□□□□□ -0.4
TRA2B-212ENST00000480461 SLC1A1P43005 524 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 PEX5P50542 639 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 NAP1L1P55209 391 aaKnown RBP12.58□□□□□ -0.4
TRA2B-212ENST00000480461 KDSRQ06136 332 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 LMAN2Q12907 356 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 CCINQ13939 588 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 PPP6R3Q5H9R7 873 aaPredicted RBP12.58□□□□□ -0.4
TRA2B-212ENST00000480461 LRRC38Q5VT99 294 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 RWDD4Q6NW29 188 aaKnown RBP12.58□□□□□ -0.4
TRA2B-212ENST00000480461 LRRC31Q6UY01 552 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 TFAP2DQ7Z6R9 452 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 DAAM2Q86T65 1068 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 NT5DC3Q86UY8 548 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 ADIPOR2Q86V24 386 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 APCDD1Q8J025 514 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 KIAA1524Q8TCG1 905 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 CLDN23Q96B33 292 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 XPO6Q96QU8 1125 aaKnown RBP12.58□□□□□ -0.4
TRA2B-212ENST00000480461 SLC2A11Q9BYW1 496 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 ZYG11BQ9C0D3 744 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRA2B-212ENST00000480461 ABCB8Q9NUT2 735 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 ETNK2Q9NVF9 386 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 TRMT1Q9NXH9 659 aaKnown RBP12.58□□□□□ -0.4
TRA2B-212ENST00000480461 LCMT1Q9UIC8 334 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 SLC27A6Q9Y2P4 619 aa12.58□□□□□ -0.4
TRA2B-212ENST00000480461 A0A0D9SEW6 157 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 A0A1B0GVM2 712 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 TCAF2A6NFQ2 919 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 MAN2B1O00754 1011 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 CLDN11O75508 207 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 FTCDO95954 541 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 RHOQP17081 205 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 AMPD1P23109 780 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 KDELR1P24390 212 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 EPHB2P29323 1055 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 GRIA2P42262 883 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 HCAR3P49019 387 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 DGKGP49619 791 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 CDH4P55283 916 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 SPEM2Q0P670 501 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 DPYSQ14117 519 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 DPYSL3Q14195 570 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 GAS6Q14393 721 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 HADHQ16836 314 aaKnown RBP12.57□□□□□ -0.4
TRA2B-212ENST00000480461 RABGAP1LQ5R372 815 aa12.57□□□□□ -0.4
TRA2B-212ENST00000480461 ACBD5Q5T8D3 534 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms