RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 TTC30AQ86WT1 665 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 MCATQ8IVS2 390 aaKnown RBP5.12□□□□□ -1.59
PTCD3-213ENST00000480102 SCN4BQ8IWT1 228 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 UNC45BQ8IWX7 931 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 PPM1KQ8N3J5 372 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 MFSD4AQ8N468 514 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 TMEM105Q8N8V8 129 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 MAB21L3Q8N8X9 362 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 KDM1BQ8NB78 822 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 RBBP8NLQ8NC74 664 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-213ENST00000480102 C1orf131Q8NDD1 294 aaKnown RBP5.12□□□□□ -1.59
PTCD3-213ENST00000480102 ZNF397Q8NF99 534 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-213ENST00000480102 RIN3Q8TB24 985 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 SH3RF2Q8TEC5 729 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 ZNF606Q8WXB4 792 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 RSAD2Q8WXG1 361 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 ASB11Q8WXH4 323 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 ING5Q8WYH8 240 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 FAM3CQ92520 227 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 ERCC4Q92889 916 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-213ENST00000480102 PGAP3Q96FM1 320 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-213ENST00000480102 EEF2KMTQ96G04 330 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 FAM84AQ96KN4 292 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 KREMEN1Q96MU8 473 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 PLA2G2FQ9BZM2 168 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 MFSD1Q9H3U5 465 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 ECT2Q9H8V3 914 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 LRRC4Q9HBW1 653 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 SIX2Q9NPC8 291 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 HPS4Q9NQG7 708 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 WDR35Q9P2L0 1181 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 EBF1Q9UH73 591 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 GGT7Q9UJ14 662 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 STRIP2Q9ULQ0 834 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-213ENST00000480102 CORINQ9Y5Q5 1042 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 PIAS3Q9Y6X2 628 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 MYH15Q9Y2K3 1946 aa5.12□□□□□ -1.59
PTCD3-213ENST00000480102 TDRD15B5MCY1 1934 aaKnown RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 KCNJ18B7U540 433 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 LEFTY2O00292 366 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 CLDN5O00501 218 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 PAX4O43316 350 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 HCRTO43612 131 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 TIMM44O43615 452 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 CACNG3O60359 315 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 LRP3O75074 770 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 BEST1O76090 585 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 PENKP01210 267 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 IGLV3-25P01717 112 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 SLC2A3P11169 496 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 CD58P19256 250 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 GRIA2P42262 883 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 MTIF2P46199 727 aaKnown RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 RAP1GAPP47736 663 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 IFNAR2P48551 515 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 GPR15P49685 360 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 JAM2P57087 298 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 DAOAP59103 153 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 MRPS21P82921 87 aaKnown RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 ZXDBP98169 803 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 CYP4F8P98187 520 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 GAD2Q05329 585 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 MPP2Q14168 576 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 KCNJ12Q14500 433 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 EIF4HQ15056 248 aaKnown RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 TPD52L1Q16890 204 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 CCDC142Q17RM4 750 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 EFHC1Q5JVL4 640 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 SNAP47Q5SQN1 464 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 FKBP15Q5T1M5 1219 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 NUGGCQ68CJ6 796 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 SCARA5Q6ZMJ2 495 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 TPRG1Q6ZUI0 275 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 SYT13Q7L8C5 426 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 BNIPLQ7Z465 357 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 TRMT11Q7Z4G4 463 aaKnown RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 SCD5Q86SK9 330 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 ARL14EPQ8N8R7 260 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 GOLM1Q8NBJ4 401 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 SCAMP5Q8TAC9 235 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 TFAP2BQ92481 460 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 SYN2Q92777 582 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 NT5C3BQ969T7 300 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 CHFRQ96EP1 664 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 COX4I2Q96KJ9 171 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 SERPINB11Q96P15 392 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 SLC22A12Q96S37 553 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 KXD1Q9BQD3 176 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 ZSWIM1Q9BR11 485 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 MED10Q9BTT4 135 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 RNF38Q9H0F5 515 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 HSD3B7Q9H2F3 369 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 SMOC2Q9H3U7 446 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 UBE2TQ9NPD8 197 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-213ENST00000480102 SPHK2Q9NRA0 654 aa5.11□□□□□ -1.59
PTCD3-213ENST00000480102 HEBP1Q9NRV9 189 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms