RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 ARSEP51690 589 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 SLC6A3Q01959 620 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 ZNF844Q08AG5 666 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 SMAD4Q13485 552 aaKnown RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 TJAP1Q5JTD0 557 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 ANO7Q6IWH7 933 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 KLC3Q6P597 504 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 CHST9Q7L1S5 443 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 C11orf96Q7Z7L8 435 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 ZC3H18Q86VM9 953 aaKnown RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 SCUBE3Q8IX30 993 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 PPHLN1Q8NEY8 458 aaKnown RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 ZNF473Q8WTR7 871 aaKnown RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 SLCO2A1Q92959 643 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 TRIM43Q96BQ3 446 aaPredicted RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 SIPA1Q96FS4 1042 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 VPS50Q96JG6 964 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 FEM1CQ96JP0 617 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 RBM15Q96T37 977 aaKnown RBP eCLIP6.1□□□□□ -1.43
CPS1-207ENST00000479988 LHX5Q9H2C1 402 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 IKZF4Q9H2S9 585 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 WDR6Q9NNW5 1121 aaKnown RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 RYDENQ9NUL5 291 aaKnown RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 PLK2Q9NYY3 685 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 CAPN7Q9Y6W3 813 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 TIMM44O43615 452 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 NDUFS3O75489 264 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 RHOBTB1O94844 696 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 CNPP09543 421 aaKnown RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 FAM163BP0C2L3 166 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 ADH5P11766 374 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 BRAFP15056 766 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 CHRNB2P17787 502 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 ITGALP20701 1170 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 ITGA8P53708 1063 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 CORO7P57737 925 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 GUCY1A3Q02108 690 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 ZBTB16Q05516 673 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 PDK2Q15119 407 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 TRIP13Q15645 432 aaPredicted RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 ZC3H12AQ5D1E8 599 aaKnown RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 DGKKQ5KSL6 1271 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 TTC39BQ5VTQ0 682 aaPredicted RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 TTC19Q6DKK2 380 aaPredicted RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 USP45Q70EL2 814 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 ZNF280BQ86YH2 543 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 OR14C36Q8NHC7 312 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 ADAM32Q8TC27 787 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 FNIP1Q8TF40 1166 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 OSCP1Q8WVF1 389 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 TBCBQ99426 244 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 IL12RB2Q99665 862 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 P2RY13Q9BPV8 354 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 SPATA16Q9BXB7 569 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 NUSAP1Q9BXS6 441 aaKnown RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 TKTL2Q9H0I9 626 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 ADAMTS10Q9H324 1103 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 CDHR5Q9HBB8 845 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 RAD18Q9NS91 495 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.1□□□□□ -1.43
CPS1-207ENST00000479988 UTP6Q9NYH9 597 aaKnown RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 SHOC2Q9UQ13 582 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 CLCA2Q9UQC9 943 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 PIAS3Q9Y6X2 628 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 RGPD3A6NKT7 1758 aaPredicted RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 RGPD4Q7Z3J3 1758 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 POC1B-GALNT4F8VUJ3 575 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 IFRD1O00458 451 aaPredicted RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 CLDN5O00501 218 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 MGEA5O60502 916 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 ATP5HO75947 161 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 RGS20O76081 388 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 HOXB2P14652 356 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 GJA1P17302 382 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 MMP8P22894 467 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 MAGEA4P43358 317 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 MAMLD1Q13495 774 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 TDGQ13569 410 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 HIF1AQ16665 826 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 TMEM31Q5JXX7 168 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 AGMOQ6ZNB7 445 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 RABEPKQ7Z6M1 372 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 VSIG1Q86XK7 387 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 ARID3BQ8IVW6 561 aaPredicted RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 MCUQ8NE86 351 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 SLC22A17Q8WUG5 538 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 PCYT2Q99447 389 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 PHF7Q9BWX1 381 aaPredicted RBP6.1□□□□□ -1.43
CPS1-207ENST00000479988 RABEP2Q9H5N1 569 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 PCDH9Q9HC56 1237 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 COMMD8Q9NX08 183 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 GDE1Q9NZC3 331 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 NENFQ9UMX5 172 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 PCDHGC3Q9UN70 934 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 NEU2Q9Y3R4 380 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 HCFC2Q9Y5Z7 792 aa6.1□□□□□ -1.43
CPS1-207ENST00000479988 DYTNA2CJ06 578 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 SIGLEC16A6NMB1 481 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 H3BNC9 293 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 FGF10O15520 208 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms