RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 SEMG2Q02383 582 aa12.4□□□□□ -0.42
GCA-208ENST00000479199 SFSWAPQ12872 951 aaKnown RBP12.4□□□□□ -0.42
GCA-208ENST00000479199 STILQ15468 1287 aa12.4□□□□□ -0.42
GCA-208ENST00000479199 C6orf118Q5T5N4 469 aa12.4□□□□□ -0.42
GCA-208ENST00000479199 RNF219Q5W0B1 726 aaPredicted RBP12.4□□□□□ -0.42
GCA-208ENST00000479199 SND1Q7KZF4 910 aaKnown RBP eCLIP12.4□□□□□ -0.42
GCA-208ENST00000479199 RRAGAQ7L523 313 aa12.4□□□□□ -0.42
GCA-208ENST00000479199 FMR1NBQ8N0W7 255 aaPredicted RBP12.4□□□□□ -0.42
GCA-208ENST00000479199 LMO3Q8TAP4 145 aa12.4□□□□□ -0.42
GCA-208ENST00000479199 PTPRN2Q92932 1015 aa12.4□□□□□ -0.42
GCA-208ENST00000479199 SKA1Q96BD8 255 aa12.4□□□□□ -0.42
GCA-208ENST00000479199 CCDC34Q96HJ3 373 aa12.4□□□□□ -0.42
GCA-208ENST00000479199 ST7Q9NRC1 585 aa12.4□□□□□ -0.42
GCA-208ENST00000479199 YKT6O15498 198 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 LATO43561 262 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 RTN2O75298 545 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 IL1BP01584 269 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 APOEP02649 317 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 PRB1P04280 392 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 PDGFRAP16234 1089 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 C5AR1P21730 350 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 GPD2P43304 727 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 RPL34P49207 117 aaKnown RBP12.39□□□□□ -0.43
GCA-208ENST00000479199 ARRB1P49407 418 aaPredicted RBP12.39□□□□□ -0.43
GCA-208ENST00000479199 BNIP3Q12983 259 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 ELAVL3Q14576 367 aaKnown RBP12.39□□□□□ -0.43
GCA-208ENST00000479199 CCDC40Q4G0X9 1142 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 ZC3H12AQ5D1E8 599 aaKnown RBP12.39□□□□□ -0.43
GCA-208ENST00000479199 SFMBT2Q5VUG0 894 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 NAPEPLDQ6IQ20 393 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 DENND1BQ6P3S1 775 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 FBXL19Q6PCT2 694 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 SPATS2Q86XZ4 545 aaKnown RBP12.39□□□□□ -0.43
GCA-208ENST00000479199 TSC1Q92574 1164 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 KREMEN1Q96MU8 473 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 GSDMAQ96QA5 445 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 TJP2Q9UDY2 1190 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 CYTH4Q9UIA0 394 aa12.39□□□□□ -0.43
GCA-208ENST00000479199 KIF26BQ2KJY2 2108 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 COL27A1Q8IZC6 1860 aaPredicted RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 TBC1D3DA0A087WVF3 549 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 TBC1D3IA0A087WXS9 549 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 TBC1D3EA0A087X179 549 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 TBC1D3KA0A087X1G2 549 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 TBC1D3FA6NER0 549 aaPredicted RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 TBC1D3LB9A6J9 549 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 E5RJQ4 531 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 F5H5T6 163 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 TLR4O00206 839 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 CAPN9O14815 690 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 PSMA7O14818 248 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 SART1O43290 800 aaKnown RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 SDC3O75056 442 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 ZIC2O95409 532 aaPredicted RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 TRUB2O95900 331 aaKnown RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 IGLV3-25P01717 112 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 TBC1D3HP0C7X1 549 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 KRT5P13647 590 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 CD44P16070 742 aaKnown RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 MAT2AP31153 395 aaKnown RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 EIF2S3P41091 472 aaKnown RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 CENPCQ03188 943 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 TARDBPQ13148 414 aaKnown RBP eCLIP12.38□□□□□ -0.43
GCA-208ENST00000479199 POM121L1PQ3SYA9 428 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 SLC45A4Q5BKX6 768 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 TBC1D3GQ6DHY5 549 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 ISM2Q6H9L7 571 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 TBC1D3CQ6IPX1 549 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 KANSL1Q7Z3B3 1105 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 TBC1D3Q8IZP1 549 aaPredicted RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 CCAR2Q8N163 923 aaKnown RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 SMARCE1Q969G3 411 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 CEP63Q96MT8 703 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 UBL7Q96S82 380 aaPredicted RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 METTL14Q9HCE5 456 aaKnown RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 CA5BQ9Y2D0 317 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 ATP6V1DQ9Y5K8 247 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 AK5Q9Y6K8 562 aa12.38□□□□□ -0.43
GCA-208ENST00000479199 SETXQ7Z333 2677 aaKnown RBP12.38□□□□□ -0.43
GCA-208ENST00000479199 PMM2O15305 246 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 SMC2O95347 1197 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 C1SP09871 688 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 RXRGP48443 463 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 IRAK1P51617 712 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 GCNT1Q02742 428 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 AGBL4Q5VU57 503 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 KLHL10Q6JEL2 608 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 CXorf57Q6NSI4 855 aaKnown RBP12.37□□□□□ -0.43
GCA-208ENST00000479199 OXR1Q8N573 874 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 MFSD2AQ8NA29 543 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 SPATA20Q8TB22 786 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 FRS2Q8WU20 508 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 FAM131CQ96AQ9 280 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 BTN2A3PQ96KV6 586 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 SPAG5Q96R06 1193 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 PRMT1Q99873 361 aaKnown RBP12.37□□□□□ -0.43
GCA-208ENST00000479199 FAM204AQ9H8W3 233 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 ACP6Q9NPH0 428 aa12.37□□□□□ -0.43
GCA-208ENST00000479199 ARHGAP20Q9P2F6 1191 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms