RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 HDCP19113 662 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 PMF1Q6P1K2 205 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 ANKS3Q6ZW76 656 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 STRADAQ7RTN6 431 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 ACSS3Q9H6R3 686 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 ARMCX1Q9P291 453 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 TOPAZ1Q8N9V7 1692 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 KYAT3Q6YP21 454 aaKnown RBP14.48□□□□□ -0.09
NPHP4-208ENST00000478423 TPGS1Q6ZTW0 290 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 GPR152Q8TDT2 470 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 FNIP1Q8TF40 1166 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 CKAP2Q8WWK9 683 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 NAF1Q96HR8 494 aaKnown RBP14.48□□□□□ -0.09
NPHP4-208ENST00000478423 EBNA1BP2Q99848 306 aaKnown RBP14.48□□□□□ -0.09
NPHP4-208ENST00000478423 FZD8Q9H461 694 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 CCDC134Q9H6E4 229 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 TMEM51Q9NW97 253 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 SFMBT1Q9UHJ3 866 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 PNMA8BQ9ULN7 279 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-208ENST00000478423 ALOX15BO15296 676 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 ADCY6O43306 1168 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 AVILO75366 819 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 ZNF7P17097 686 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-208ENST00000478423 CD86P42081 329 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 HIST2H2ACQ16777 129 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-208ENST00000478423 FUT11Q495W5 492 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 CACHD1Q5VU97 1274 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 HIST2H2AA3Q6FI13 130 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 EXOC3L1Q86VI1 746 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 DPF3Q92784 378 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 FCRL2Q96LA5 508 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-208ENST00000478423 RBBP8Q99708 897 aa14.48□□□□□ -0.09
NPHP4-208ENST00000478423 UBDO15205 165 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 TLR5O60602 858 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 DAB1O75553 588 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 ABHD2P08910 425 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 PAX3P23760 479 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 PSEN1P49768 467 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 NAGLUP54802 743 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 SP2Q02086 613 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 PCID2Q5JVF3 399 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 BNC2Q6ZN30 1099 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-208ENST00000478423 POU5F2Q8N7G0 328 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 SLC4A11Q8NBS3 891 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 NDRG1Q92597 394 aaKnown RBP14.47□□□□□ -0.09
NPHP4-208ENST00000478423 P2RY11Q96G91 374 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 ZYG11BQ9C0D3 744 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 ADNPQ9H2P0 1102 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 C22orf31O95567 290 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 HSPA1AP0DMV8 641 aaKnown RBP14.47□□□□□ -0.09
NPHP4-208ENST00000478423 HSPA1BP0DMV9 641 aaKnown RBP14.47□□□□□ -0.09
NPHP4-208ENST00000478423 PBLDP30039 288 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-208ENST00000478423 GBE1Q04446 702 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 BCL2L1Q07817 233 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 KRT72Q14CN4 511 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 NR6A1Q15406 480 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 AP1ARQ63HQ0 302 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 FBXO39Q8N4B4 442 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 MSL3Q8N5Y2 521 aaKnown RBP14.47□□□□□ -0.09
NPHP4-208ENST00000478423 C2orf49Q9BVC5 232 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-208ENST00000478423 CD248Q9HCU0 757 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 MRPL17Q9NRX2 175 aaKnown RBP14.47□□□□□ -0.09
NPHP4-208ENST00000478423 FAM50BQ9Y247 325 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 EFR3BQ9Y2G0 817 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 FAM95CA0A1B0GW59 222 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 MYO1GB0I1T2 1018 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 GUCA1CO95843 209 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 CHRNB2P17787 502 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 VHLP40337 213 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 ANKS6Q68DC2 871 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 SCARA3Q6AZY7 606 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 MON1AQ86VX9 555 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 FAM162AQ96A26 154 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 DEFB118Q96PH6 123 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 SEMA3CQ99985 751 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 DNMT3LQ9UJW3 386 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 AJAP1Q9UKB5 411 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-208ENST00000478423 PCDHGC3Q9UN70 934 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 DOLKQ9UPQ8 538 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 NR2E1Q9Y466 385 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 PRRC2BQ5JSZ5 2229 aaKnown RBP14.47□□□□□ -0.09
NPHP4-208ENST00000478423 A8MX80 341 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 TPP1O14773 563 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 SNX3O60493 162 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 CBX6O95503 412 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 CDK7P50613 346 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 LILRA4P59901 499 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 SH3D19Q5HYK7 790 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 ATAD1Q8NBU5 361 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 TSPAN18Q96SJ8 248 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 SPATA16Q9BXB7 569 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 DCLRE1BQ9H816 532 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 CLCA2Q9UQC9 943 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 ACTL7BQ9Y614 415 aa14.47□□□□□ -0.09
NPHP4-208ENST00000478423 DUOX1Q9NRD9 1551 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 CSH1P0DML2 217 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 CSH2P0DML3 217 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 OR1D2P34982 312 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 MAXP61244 160 aa14.46□□□□□ -0.09
NPHP4-208ENST00000478423 NAB1Q13506 487 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms