RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 FBXL8Q96CD0 374 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 CEP170P1Q96L14 293 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 FIZ1Q96SL8 496 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 TM9SF2Q99805 663 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 SPOCK3Q9BQ16 436 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 TMEM120AQ9BXJ8 343 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 SPATC1LQ9H0A9 340 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 TRIT1Q9H3H1 467 aaKnown RBP12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 SLC9A2Q9UBY0 812 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 AP3M1Q9Y2T2 418 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 NR2E1Q9Y466 385 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 CORINQ9Y5Q5 1042 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 A8MU76 341 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 hCG_2039718K7EN88 272 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 K7ENM7 598 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 GIPC1O14908 333 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 CLIC2O15247 247 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 DYNC1LI2O43237 492 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 KPNA6O60684 536 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 AKAP3O75969 853 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 SLC25A27O95847 323 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 OLFM2O95897 454 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 ATF6P18850 670 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 GRIK1P39086 918 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 GALNT2Q10471 571 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 SELPLGQ14242 412 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 LEXMQ3ZCV2 418 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 IGSF11Q5DX21 431 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 LINC00299Q6ZSB3 139 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 BEND5Q7L4P6 421 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 DAW1Q8N136 415 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 Q8N9G6 341 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 BCL7CQ8WUZ0 217 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 LSM14BQ9BX40 385 aaKnown RBP12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 GON7Q9BXV9 100 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 SLC4A5Q9BY07 1137 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 FRMD8Q9BZ67 464 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 FBXO6Q9NRD1 293 aaPredicted RBP12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 ASIC3Q9UHC3 531 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 IP6K2Q9UHH9 426 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 BCAP29Q9UHQ4 241 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 PCDHGB4Q9UN71 923 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 AGTPBP1Q9UPW5 1226 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 KCNH4Q9UQ05 1017 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 GNEQ9Y223 722 aaKnown RBP12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 TRAF6Q9Y4K3 522 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 PCDHGB5Q9Y5G0 923 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 PCM1Q15154 2024 aa12.94□□□□□ -0.34
RTFDC1-207ENST00000477573 WDR91A4D1P6 747 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 GLTPD2A6NH11 291 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 H3BMQ9 156 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 ASNA1O43681 348 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 SULT1B1O43704 296 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 GCATO75600 419 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 ATE1O95260 518 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 ITGAXP20702 1163 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 ICAM3P32942 547 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 ETV1P50549 477 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 SNRPFP62306 86 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 CAV1Q03135 178 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 KLHL30Q0D2K2 578 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 RAPGEF1Q13905 1077 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 TFDP1Q14186 410 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 KBTBD6Q86V97 674 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 CCDC25Q86WR0 208 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 SNX32Q86XE0 403 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 SLC25A41Q8N5S1 370 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 PMEPA1Q969W9 287 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 CLPTM1LQ96KA5 538 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 COG8Q96MW5 612 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 ACCSQ96QU6 501 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 ACAT2Q9BWD1 397 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 STRA6Q9BX79 667 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 TRIM15Q9C019 465 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 CPNE5Q9HCH3 593 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 GABBR1Q9UBS5 961 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 ADAMTS1Q9UHI8 967 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 SLC8A2Q9UPR5 921 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 A0A0G2JMZ2 1700 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 SYNGAP1Q96PV0 1343 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 A0A087WXM4 84 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 DYRK3O43781 588 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 RGS20O76081 388 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 CAPNS1P04632 268 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 ABHD2P08910 425 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 KRT13P13646 458 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 OSBPP22059 807 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 CDC20Q12834 499 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 SNX17Q15036 470 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 UGCGQ16739 394 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 LRIT3Q3SXY7 679 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 C5orf22Q49AR2 442 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 DCAF17Q5H9S7 520 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 CORO6Q6QEF8 472 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 LYSMD3Q7Z3D4 306 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 C11orf96Q7Z7L8 435 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 METTL3Q86U44 580 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 SLC9A9Q8IVB4 645 aa12.93□□□□□ -0.34
RTFDC1-207ENST00000477573 CHERPQ8IWX8 916 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms