RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 WASHC5Q12768 1159 aa29.58■■■□□ 2.33
VEGFA-211ENST00000476772 RABGAP1LQ5R372 815 aa29.58■■■□□ 2.33
VEGFA-211ENST00000476772 CCDC13Q8IYE1 715 aa29.58■■■□□ 2.33
VEGFA-211ENST00000476772 ATPAF2Q8N5M1 289 aa29.58■■■□□ 2.33
VEGFA-211ENST00000476772 CEP41Q9BYV8 373 aa29.58■■■□□ 2.33
VEGFA-211ENST00000476772 TASP1Q9H6P5 420 aa29.58■■■□□ 2.33
VEGFA-211ENST00000476772 CFAP97Q9P2B7 532 aa29.58■■■□□ 2.33
VEGFA-211ENST00000476772 A0A0A0MRY4 1105 aa29.57■■■□□ 2.32
VEGFA-211ENST00000476772 SGSHP51688 502 aa29.57■■■□□ 2.32
VEGFA-211ENST00000476772 NDST2P52849 883 aa29.57■■■□□ 2.32
VEGFA-211ENST00000476772 MORF4L2Q15014 288 aa29.57■■■□□ 2.32
VEGFA-211ENST00000476772 ANKRD20A2Q5SQ80 823 aa29.57■■■□□ 2.32
VEGFA-211ENST00000476772 ANKRD20A1Q5TYW2 823 aa29.57■■■□□ 2.32
VEGFA-211ENST00000476772 ANKRD20A3Q5VUR7 823 aa29.57■■■□□ 2.32
VEGFA-211ENST00000476772 TMC3Q7Z5M5 1100 aa29.57■■■□□ 2.32
VEGFA-211ENST00000476772 PCGF5Q86SE9 256 aa29.57■■■□□ 2.32
VEGFA-211ENST00000476772 TSEN2Q8NCE0 465 aaKnown RBP29.57■■■□□ 2.32
VEGFA-211ENST00000476772 SMG7Q92540 1137 aaKnown RBP29.57■■■□□ 2.32
VEGFA-211ENST00000476772 SPATA13Q96N96 652 aa29.57■■■□□ 2.32
VEGFA-211ENST00000476772 CDCA3Q99618 268 aaPredicted RBP29.57■■■□□ 2.32
VEGFA-211ENST00000476772 DDX50Q9BQ39 737 aaKnown RBP29.57■■■□□ 2.32
VEGFA-211ENST00000476772 PIDD1Q9HB75 910 aa29.57■■■□□ 2.32
VEGFA-211ENST00000476772 LSM7Q9UK45 103 aaKnown RBP29.57■■■□□ 2.32
VEGFA-211ENST00000476772 TRANK1O15050 2925 aa29.57■■■□□ 2.32
VEGFA-211ENST00000476772 TSPAN3O60637 253 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 ZNF189O75820 626 aaPredicted RBP29.56■■■□□ 2.32
VEGFA-211ENST00000476772 STK10O94804 968 aaKnown RBP29.56■■■□□ 2.32
VEGFA-211ENST00000476772 CHKAP35790 457 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 RPS24P62847 133 aaKnown RBP29.56■■■□□ 2.32
VEGFA-211ENST00000476772 TMC5Q6UXY8 1006 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 CHRDL2Q6WN34 429 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 PPIL6Q8IXY8 311 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 CMTM8Q8IZV2 173 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 IGFLR1Q9H665 355 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 RAB6BQ9NRW1 208 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 ARHGAP26Q9UNA1 814 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 SH3BP1Q9Y3L3 701 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 LEFTY2O00292 366 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 NDC80O14777 642 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 HSPA9P38646 679 aaKnown RBP29.56■■■□□ 2.32
VEGFA-211ENST00000476772 MAPKAPK2P49137 400 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 PAPOLAP51003 745 aaKnown RBP29.56■■■□□ 2.32
VEGFA-211ENST00000476772 DHX9Q08211 1270 aaKnown RBP29.56■■■□□ 2.32
VEGFA-211ENST00000476772 FAXCQ5TGI0 409 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 ANKRD22Q5VYY1 191 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 ARHGEF18Q6ZSZ5 1173 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 MREGQ8N565 214 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 PRCCQ92733 491 aaPredicted RBP29.56■■■□□ 2.32
VEGFA-211ENST00000476772 PWWP2AQ96N64 755 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 TSGA13Q96PP4 275 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 SFXN1Q9H9B4 322 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 SHOC2Q9UQ13 582 aa29.56■■■□□ 2.32
VEGFA-211ENST00000476772 MAFKO60675 156 aa29.55■■■□□ 2.32
VEGFA-211ENST00000476772 METTL18O95568 372 aa29.55■■■□□ 2.32
VEGFA-211ENST00000476772 PTPN3P26045 913 aa29.55■■■□□ 2.32
VEGFA-211ENST00000476772 OR1E1P30953 314 aa29.55■■■□□ 2.32
VEGFA-211ENST00000476772 AVPR1AP37288 418 aa29.55■■■□□ 2.32
VEGFA-211ENST00000476772 ZNF33AQ06730 810 aa29.55■■■□□ 2.32
VEGFA-211ENST00000476772 C4orf22Q6V702 233 aa29.55■■■□□ 2.32
VEGFA-211ENST00000476772 ZNF567Q8N184 647 aa29.55■■■□□ 2.32
VEGFA-211ENST00000476772 NAT8LQ8N9F0 302 aa29.55■■■□□ 2.32
VEGFA-211ENST00000476772 HMCESQ96FZ2 354 aa29.55■■■□□ 2.32
VEGFA-211ENST00000476772 TXLNGYQ9BZA5 131 aa29.55■■■□□ 2.32
VEGFA-211ENST00000476772 TCRBV7S3A2A0A539 114 aa29.54■■■□□ 2.32
VEGFA-211ENST00000476772 RASA4BC9J798 803 aa29.54■■■□□ 2.32
VEGFA-211ENST00000476772 MAP2K7O14733 419 aa29.54■■■□□ 2.32
VEGFA-211ENST00000476772 RASA4O43374 803 aa29.54■■■□□ 2.32
VEGFA-211ENST00000476772 CCNCP24863 283 aa29.54■■■□□ 2.32
VEGFA-211ENST00000476772 CDH4P55283 916 aa29.54■■■□□ 2.32
VEGFA-211ENST00000476772 HTR3DQ70Z44 454 aa29.54■■■□□ 2.32
VEGFA-211ENST00000476772 CCDC25Q86WR0 208 aa29.54■■■□□ 2.32
VEGFA-211ENST00000476772 PPP2R3CQ969Q6 453 aa29.54■■■□□ 2.32
VEGFA-211ENST00000476772 PRO3102Q9H379 93 aa29.54■■■□□ 2.32
VEGFA-211ENST00000476772 CCL26Q9Y258 94 aa29.54■■■□□ 2.32
VEGFA-211ENST00000476772 TNRC18O15417 2968 aaPredicted RBP29.54■■■□□ 2.32
VEGFA-211ENST00000476772 ZNF197O14709 1029 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 MTSS1O43312 755 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 OPHN1O60890 802 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 PPFIA2O75334 1257 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 PAPLNO95428 1278 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 CEBPBP17676 345 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 ZBTB17Q13105 803 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 HOOK3Q86VS8 718 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 ZCCHC9Q8N567 271 aaKnown RBP29.53■■■□□ 2.32
VEGFA-211ENST00000476772 ING5Q8WYH8 240 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 ETNK1Q9HBU6 452 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 DNAJC17Q9NVM6 304 aaKnown RBP29.53■■■□□ 2.32
VEGFA-211ENST00000476772 ATP8A1Q9Y2Q0 1164 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 ATP8B1O43520 1251 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 RAMP2O60895 175 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 TMEM63AO94886 807 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 KCNJ11Q14654 390 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 SYCP2LQ5T4T6 812 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 LRRC49Q8IUZ0 686 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 FAM217AQ8IXS0 508 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 SH3RF2Q8TEC5 729 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 RETREG1Q9H6L5 497 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 DZANK1Q9NVP4 752 aa29.53■■■□□ 2.32
VEGFA-211ENST00000476772 KLHL8Q9P2G9 620 aaPredicted RBP29.53■■■□□ 2.32
VEGFA-211ENST00000476772 MRPS23Q9Y3D9 190 aaKnown RBP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms