RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 DDX50Q9BQ39 737 aaKnown RBP20.81■□□□□ 0.92
EDEM3-206ENST00000474725 BRD8Q9H0E9 1235 aa20.81■□□□□ 0.92
EDEM3-206ENST00000474725 DZANK1Q9NVP4 752 aa20.81■□□□□ 0.92
EDEM3-206ENST00000474725 ANAPC5Q9UJX4 755 aa20.81■□□□□ 0.92
EDEM3-206ENST00000474725 LSM7Q9UK45 103 aaKnown RBP20.81■□□□□ 0.92
EDEM3-206ENST00000474725 MRPS23Q9Y3D9 190 aaKnown RBP20.81■□□□□ 0.92
EDEM3-206ENST00000474725 SH3BP1Q9Y3L3 701 aa20.81■□□□□ 0.92
EDEM3-206ENST00000474725 TRANK1O15050 2925 aa20.81■□□□□ 0.92
EDEM3-206ENST00000474725 DOCK4Q8N1I0 1966 aa20.81■□□□□ 0.92
EDEM3-206ENST00000474725 DNALI1O14645 258 aaPredicted RBP20.8■□□□□ 0.92
EDEM3-206ENST00000474725 LINC01565O15544 149 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 GLP2RO95838 553 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 RPS24P62847 133 aaKnown RBP20.8■□□□□ 0.92
EDEM3-206ENST00000474725 RABGAP1LQ5R372 815 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 RARS2Q5T160 578 aaKnown RBP20.8■□□□□ 0.92
EDEM3-206ENST00000474725 HTR3DQ70Z44 454 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 UMODL1-AS1Q8N2C9 162 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.8■□□□□ 0.923e-6■■■■■ 50.8
EDEM3-206ENST00000474725 ZSWIM3Q96MP5 696 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 APOL5Q9BWW9 433 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 SEPT10Q9P0V9 454 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 CCL26Q9Y258 94 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 C5orf60A6NFR6 353 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 HDXQ7Z353 690 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 BBOF1Q8ND07 529 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 SH3RF2Q8TEC5 729 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 DONSONQ9NYP3 566 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 PAK5Q9P286 719 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 TPX2Q9ULW0 747 aaKnown RBP20.8■□□□□ 0.92
EDEM3-206ENST00000474725 NUP205Q92621 2012 aa20.8■□□□□ 0.92
EDEM3-206ENST00000474725 SOBPA7XYQ1 873 aa20.79■□□□□ 0.92
EDEM3-206ENST00000474725 KCNK1O00180 336 aa20.79■□□□□ 0.92
EDEM3-206ENST00000474725 MAP2K7O14733 419 aa20.79■□□□□ 0.92
EDEM3-206ENST00000474725 GCATO75600 419 aa20.79■□□□□ 0.92
EDEM3-206ENST00000474725 ACTN2P35609 894 aa20.79■□□□□ 0.92
EDEM3-206ENST00000474725 PAPOLAP51003 745 aaKnown RBP20.79■□□□□ 0.92
EDEM3-206ENST00000474725 NDST2P52849 883 aa20.79■□□□□ 0.92
EDEM3-206ENST00000474725 WASHC5Q12768 1159 aa20.79■□□□□ 0.92
EDEM3-206ENST00000474725 EMBQ6PCB8 327 aa20.79■□□□□ 0.92
EDEM3-206ENST00000474725 USP13Q92995 863 aaPredicted RBP20.79■□□□□ 0.92
EDEM3-206ENST00000474725 FMO2Q99518 471 aa20.79■□□□□ 0.92
EDEM3-206ENST00000474725 RNF103O00237 685 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 OR1E1P30953 314 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 TNNT3P45378 269 aaPredicted RBP20.78■□□□□ 0.92
EDEM3-206ENST00000474725 CDH4P55283 916 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 CBX2Q14781 532 aaPredicted RBP20.78■□□□□ 0.92
EDEM3-206ENST00000474725 HIBCHQ6NVY1 386 aaPredicted RBP20.78■□□□□ 0.92
EDEM3-206ENST00000474725 RHBDF2Q6PJF5 856 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 TMEM184AQ6ZMB5 413 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 BBS7Q8IWZ6 715 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 CCDC13Q8IYE1 715 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 ATPAF2Q8N5M1 289 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 EFHBQ8N7U6 833 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 CAVIN3Q969G5 261 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 TSGA13Q96PP4 275 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 FERMT1Q9BQL6 677 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 CEP41Q9BYV8 373 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 ZNF510Q9Y2H8 683 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 A0A0A0MRY4 1105 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 RASA4BC9J798 803 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 RASA4O43374 803 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 MAPKAPK2P49137 400 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 ANKRD20A2Q5SQ80 823 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 RNASEH2BQ5TBB1 312 aaKnown RBP20.78■□□□□ 0.92
EDEM3-206ENST00000474725 ANKRD20A1Q5TYW2 823 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 ANKRD20A3Q5VUR7 823 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 FAM217AQ8IXS0 508 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 RIN3Q8TB24 985 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 HMCESQ96FZ2 354 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 SPATA13Q96N96 652 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 FAM129AQ9BZQ8 928 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 TDP1Q9NUW8 608 aa20.78■□□□□ 0.92
EDEM3-206ENST00000474725 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.77■□□□□ 0.92
EDEM3-206ENST00000474725 MAFKO60675 156 aa20.77■□□□□ 0.92
EDEM3-206ENST00000474725 PRAMEF12O95522 483 aa20.77■□□□□ 0.92
EDEM3-206ENST00000474725 CCNCP24863 283 aa20.77■□□□□ 0.92
EDEM3-206ENST00000474725 PTPN3P26045 913 aa20.77■□□□□ 0.92
EDEM3-206ENST00000474725 CAV1Q03135 178 aa20.77■□□□□ 0.92
EDEM3-206ENST00000474725 CPT1BQ92523 772 aa20.77■□□□□ 0.92
EDEM3-206ENST00000474725 RETREG1Q9H6L5 497 aa20.77■□□□□ 0.92
EDEM3-206ENST00000474725 MTRF1LQ9UGC7 380 aaKnown RBP20.77■□□□□ 0.92
EDEM3-206ENST00000474725 CDH22Q9UJ99 828 aa20.77■□□□□ 0.92
EDEM3-206ENST00000474725 GFRA2O00451 464 aa20.76■□□□□ 0.91
EDEM3-206ENST00000474725 CLDN11O75508 207 aa20.76■□□□□ 0.91
EDEM3-206ENST00000474725 STK10O94804 968 aaKnown RBP20.76■□□□□ 0.91
EDEM3-206ENST00000474725 METTL18O95568 372 aa20.76■□□□□ 0.91
EDEM3-206ENST00000474725 BASP1P80723 227 aaKnown RBP20.76■□□□□ 0.91
EDEM3-206ENST00000474725 ANKRD54Q6NXT1 300 aa20.76■□□□□ 0.91
EDEM3-206ENST00000474725 ZNF567Q8N184 647 aa20.76■□□□□ 0.91
EDEM3-206ENST00000474725 RAB6BQ9NRW1 208 aa20.76■□□□□ 0.91
EDEM3-206ENST00000474725 ZMYM5Q9UJ78 669 aa20.76■□□□□ 0.91
EDEM3-206ENST00000474725 FARP1Q9Y4F1 1045 aaPredicted RBP20.76■□□□□ 0.91
EDEM3-206ENST00000474725 HELZP42694 1942 aaKnown RBP20.76■□□□□ 0.91
EDEM3-206ENST00000474725 CDH23Q9H251 3354 aa20.76■□□□□ 0.91
EDEM3-206ENST00000474725 E2F8A0AVK6 867 aa20.76■□□□□ 0.91
EDEM3-206ENST00000474725 ARHGAP42A6NI28 874 aa20.76■□□□□ 0.91
EDEM3-206ENST00000474725 RAMP2O60895 175 aa20.76■□□□□ 0.91
EDEM3-206ENST00000474725 TBL1XO60907 577 aa20.76■□□□□ 0.91
EDEM3-206ENST00000474725 ZNF189O75820 626 aaPredicted RBP20.76■□□□□ 0.91
EDEM3-206ENST00000474725 ZNF33AQ06730 810 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms