RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 DNAJC17Q9NVM6 304 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 UBP1Q9NZI7 540 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 PAK5Q9P286 719 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 SIX4Q9UIU6 781 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 USP18Q9UMW8 372 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 USP15Q9Y4E8 981 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 LRRC37A2A6NM11 1700 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 LCTP09848 1927 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 PTPRFP10586 1907 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 DOCK5Q9H7D0 1870 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 PAPPA2Q9BXP8 1791 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 SMIM35A0A1B0GVV1 85 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 CFAP73A6NFT4 308 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 GLTPD2A6NH11 291 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 CCT8L1PA6NM43 557 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 POC1B-GALNT4F8VUJ3 575 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 ALOX15BO15296 676 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 KPNA6O60684 536 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 HUS1O60921 280 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 LRCH4O75427 683 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 ZWINTO95229 277 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 GJB6O95452 261 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 TRUB2O95900 331 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 GJB1P08034 283 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 GSTA2P09210 222 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 CYP2C9P11712 490 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 IVDP26440 423 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 MIPP30301 263 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 ADCYAP1R1P41586 468 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 MSH2P43246 934 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 GPD2P43304 727 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 CTCFP49711 727 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 SLC18A1P54219 525 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 BCAR1P56945 870 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 GEMIN4P57678 1058 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 SLC6A3Q01959 620 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 SLC25A11Q02978 314 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 ACTN3Q08043 901 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 BST2Q10589 180 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 ACVR2BQ13705 512 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 MOGSQ13724 837 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 GRB14Q14449 540 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 OASLQ15646 514 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 SMTNL2Q2TAL5 461 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 CCDC38Q502W7 563 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 TNFAIP8L3Q5GJ75 292 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 EFHC1Q5JVL4 640 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 RNASEH2BQ5TBB1 312 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 SCYL2Q6P3W7 929 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 MOB2Q70IA6 237 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 PDZD4Q76G19 769 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 SPATA21Q7Z572 469 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 CCDC91Q7Z6B0 441 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 ANKS1BQ7Z6G8 1248 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 RSPH3Q86UC2 560 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 EXOC3L1Q86VI1 746 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 CDR2LQ86X02 465 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 NME8Q8N427 588 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 LINC01465Q8N7H1 131 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 DNAJC5GQ8N7S2 189 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 APPL2Q8NEU8 664 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 CMASQ8NFW8 434 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 JOSD2Q8TAC2 188 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 MDM1Q8TC05 714 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 SPATA18Q8TC71 538 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 MGARPQ8TDB4 240 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 LRRC8CQ8TDW0 803 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 PRCCQ92733 491 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 USP6NLQ92738 828 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 SNX27Q96L92 541 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 TGS1Q96RS0 853 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 CPXM1Q96SM3 734 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 CYTH2Q99418 400 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 TMEM121Q9BTD3 319 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 FAM49AQ9H0Q0 323 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 TRABDQ9H4I3 376 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 MINDY3Q9H8M7 445 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 SP110Q9HB58 689 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 GBA2Q9HCG7 927 aaPredicted RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 NGRNQ9NPE2 291 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 KLHL14Q9P2G3 628 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 PCSK1NQ9UHG2 260 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 XPO7Q9UIA9 1087 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 TSPAN16Q9UKR8 245 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 GINS2Q9Y248 185 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 ARL2BPQ9Y2Y0 163 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 SNX9Q9Y5X1 595 aa6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.09□□□□□ -1.43
ATPAF1-204ENST00000474020 WDR81Q562E7 1941 aa6.09□□□□□ -1.44
ATPAF1-204ENST00000474020 CLUHO75153 1309 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 ARHGEF37A1IGU5 675 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 C2CD4BA6NLJ0 364 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 A8MXQ7 604 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 TCP11X1B4DZS4 312 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 BTBD19C9JJ37 291 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 E5RJQ4 531 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 TM9SF1O15321 606 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 CHADO15335 359 aa6.08□□□□□ -1.44
ATPAF1-204ENST00000474020 PRPF4O43172 522 aaKnown RBP eCLIP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms