RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 YY1P25490 414 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 STAT1P42224 750 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 PMS2P54278 862 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 TRAF3Q13114 568 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 KCNAB1Q14722 419 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 CYB5RLQ6IPT4 315 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 TLDC1Q6P9B6 456 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 PALB2Q86YC2 1186 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 KRTAP7-1Q8IUC3 87 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 SDR16C5Q8N3Y7 309 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 KDM1BQ8NB78 822 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 IL31RAQ8NI17 732 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 SPATA20Q8TB22 786 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 ZNF333Q96JL9 665 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 APOLD1Q96LR9 279 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 WDR24Q96S15 920 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 ZNF347Q96SE7 839 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 POLDIP3Q9BY77 421 aaKnown RBP2.16□□□□□ -2.06
CCDC39-203ENST00000473854 GAREM1Q9H706 876 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 UBTD1Q9HAC8 227 aa2.16□□□□□ -2.06
CCDC39-203ENST00000473854 AGO1Q9UL18 857 aaKnown RBP2.16□□□□□ -2.06
CCDC39-203ENST00000473854 TULP2O00295 520 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 P2RY10O00398 339 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 UBXN7O94888 489 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 CRYAAP02489 173 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 MYZAPP0CAP1 466 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 C21orf33P30042 268 aaPredicted RBP2.15□□□□□ -2.07
CCDC39-203ENST00000473854 CHRNA5P30532 468 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 HNF4GQ14541 408 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 TMEM30BQ3MIR4 351 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 PLA2G4FQ68DD2 849 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 NAPEPLDQ6IQ20 393 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 RETSATQ6NUM9 610 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 ERAP2Q6P179 960 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 B3GNT9Q6UX72 402 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 UNQ6126/PRO20091Q6UXV3 157 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 MARK2Q7KZI7 788 aaKnown RBP2.15□□□□□ -2.07
CCDC39-203ENST00000473854 GTSCR1Q86UQ5 136 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 DPP10Q8N608 796 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 MAPK1IP1LQ8NDC0 245 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 GRAPLQ8TC17 118 aaPredicted RBP2.15□□□□□ -2.07
CCDC39-203ENST00000473854 TMEM163Q8TC26 289 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 DIS3LQ8TF46 1054 aaKnown RBP2.15□□□□□ -2.07
CCDC39-203ENST00000473854 KAT2AQ92830 837 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 USP13Q92995 863 aaPredicted RBP2.15□□□□□ -2.07
CCDC39-203ENST00000473854 EIF3CQ99613 913 aaKnown RBP2.15□□□□□ -2.07
CCDC39-203ENST00000473854 SORBS1Q9BX66 1292 aaKnown RBP2.15□□□□□ -2.07
CCDC39-203ENST00000473854 TCF7L1Q9HCS4 588 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 DDX56Q9NY93 547 aaKnown RBP2.15□□□□□ -2.07
CCDC39-203ENST00000473854 GABBR1Q9UBS5 961 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 MALT1Q9UDY8 824 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 B3GNT3Q9Y2A9 372 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 LUC7L2Q9Y383 392 aaKnown RBP2.15□□□□□ -2.07
CCDC39-203ENST00000473854 KIF21BO75037 1637 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 CUX1P39880 1505 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 PBRM1Q86U86 1689 aa2.15□□□□□ -2.07
CCDC39-203ENST00000473854 NCAPD3P42695 1498 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 IGHV4-28A0A0C4DH34 117 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 STMND1H3BQB6 276 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 CCNT2O60583 730 aaKnown RBP2.14□□□□□ -2.07
CCDC39-203ENST00000473854 BRAFP15056 766 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 CDK11BP21127 795 aaKnown RBP2.14□□□□□ -2.07
CCDC39-203ENST00000473854 TNFSF8P32971 234 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 GSTM5P46439 218 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 CSRP3P50461 194 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 SUMO3P55854 103 aaPredicted RBP2.14□□□□□ -2.07
CCDC39-203ENST00000473854 LMO4P61968 165 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 IFIT1BQ5T764 474 aaKnown RBP2.14□□□□□ -2.07
CCDC39-203ENST00000473854 SUSD1Q6UWL2 747 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 FOXL2NBQ6ZUU3 175 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 TUBA1AQ71U36 451 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 NT5C1BQ96P26 610 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 ZNF385AQ96PM9 386 aaKnown RBP2.14□□□□□ -2.07
CCDC39-203ENST00000473854 TUBA1CQ9BQE3 449 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 UBXN6Q9BZV1 441 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 CHST8Q9H2A9 424 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 KLHL31Q9H511 634 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 ZNF696Q9H7X3 374 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 ZNF334Q9HCZ1 680 aaPredicted RBP2.14□□□□□ -2.07
CCDC39-203ENST00000473854 COL20A1Q9P218 1284 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 USP35Q9P2H5 1018 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 ITGB1BP2Q9UKP3 347 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 PCDHB7Q9Y5E2 793 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 CTTNBP2Q8WZ74 1663 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 LRRIQ1Q96JM4 1722 aa2.14□□□□□ -2.07
CCDC39-203ENST00000473854 RUSC2Q8N2Y8 1516 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 CXorf65A6NEN9 183 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 CAPN8A6NHC0 703 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 CBFA2T3O75081 653 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 IL1R1P14778 569 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 ZKSCAN1P17029 563 aaPredicted RBP2.13□□□□□ -2.07
CCDC39-203ENST00000473854 AVPR1AP37288 418 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 CARSP49589 748 aaKnown RBP2.13□□□□□ -2.07
CCDC39-203ENST00000473854 NR0B1P51843 470 aaKnown RBP2.13□□□□□ -2.07
CCDC39-203ENST00000473854 KRTAP10-1P60331 282 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 BNC1Q01954 994 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 GRIK2Q13002 908 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 GPS1Q13098 491 aa2.13□□□□□ -2.07
CCDC39-203ENST00000473854 TMEM196Q5HYL7 178 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms