RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 LRRC72A6NJI9 287 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 MOCS2O96007 188 aaPredicted RBP9.94□□□□□ -0.82
MCF2L-223ENST00000473345 MT-CO3P00414 261 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 MPOP05164 745 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 CTSLP07711 333 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 VDRP11473 427 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 GLDCP23378 1020 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 ACP1P24666 158 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 HNF1BP35680 557 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 ZNF445P59923 1031 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 CFHR1Q03591 330 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 KCNH2Q12809 1159 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 CNTN1Q12860 1018 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 LY6DQ14210 128 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 TAF5Q15542 800 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 AGBL4Q5VU57 503 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 RAP1GAP2Q684P5 730 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 NAPEPLDQ6IQ20 393 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 CXorf57Q6NSI4 855 aaKnown RBP9.94□□□□□ -0.82
MCF2L-223ENST00000473345 LCLAT1Q6UWP7 414 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 GPR155Q7Z3F1 870 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 LGI2Q8N0V4 545 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 SIX6OS1Q8N1H7 587 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 MFSD2AQ8NA29 543 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 HJURPQ8NCD3 748 aaPredicted RBP9.94□□□□□ -0.82
MCF2L-223ENST00000473345 LMO3Q8TAP4 145 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 TTC9Q92623 222 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 KLK6Q92876 244 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 ERCC4Q92889 916 aaPredicted RBP9.94□□□□□ -0.82
MCF2L-223ENST00000473345 SLC35C1Q96A29 364 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 FAXDC2Q96IV6 333 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 PRMT1Q99873 361 aaKnown RBP9.94□□□□□ -0.82
MCF2L-223ENST00000473345 OMDQ99983 421 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 ERVMER34-1Q9H9K5 563 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 FZD3Q9NPG1 666 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 ACP6Q9NPH0 428 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 CLCA2Q9UQC9 943 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 NCKAP1Q9Y2A7 1128 aa9.94□□□□□ -0.82
MCF2L-223ENST00000473345 TBC1D3DA0A087WVF3 549 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 TBC1D3IA0A087WXS9 549 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 TBC1D3EA0A087X179 549 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 TBC1D3KA0A087X1G2 549 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 EDDM13A0A1B0GTR0 161 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 A0A1B0GVM2 712 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 TBC1D3FA6NER0 549 aaPredicted RBP9.93□□□□□ -0.82
MCF2L-223ENST00000473345 TBC1D3LB9A6J9 549 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 I6L893 689 aaPredicted RBP9.93□□□□□ -0.82
MCF2L-223ENST00000473345 IRAK2O43187 625 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 PLRG1O43660 514 aaKnown RBP9.93□□□□□ -0.82
MCF2L-223ENST00000473345 IL1BP01584 269 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 IGLV3-25P01717 112 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 ASLP04424 464 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 TBC1D3HP0C7X1 549 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 SETSIPP0DME0 302 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 PDGFRAP16234 1089 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 PRLRP16471 622 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 C5AR1P21730 350 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 GGCXP38435 758 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 PRCPP42785 496 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 RPL34P49207 117 aaKnown RBP9.93□□□□□ -0.82
MCF2L-223ENST00000473345 ECT2LQ008S8 904 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 CENPCQ03188 943 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 EDRF1Q3B7T1 1238 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 INAVAQ3KP66 663 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 ZC3H12AQ5D1E8 599 aaKnown RBP9.93□□□□□ -0.82
MCF2L-223ENST00000473345 TPRG1LQ5T0D9 272 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 ANKRD40Q6AI12 368 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 TBC1D3GQ6DHY5 549 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 TBC1D3CQ6IPX1 549 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 DENND1BQ6P3S1 775 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 TMEM270Q6UE05 265 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 KRBA2Q6ZNG9 492 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 LRRC69Q6ZNQ3 347 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 SND1Q7KZF4 910 aaKnown RBP eCLIP9.93□□□□□ -0.82
MCF2L-223ENST00000473345 ZNF605Q86T29 641 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 ARHGEF19Q8IW93 802 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 TBC1D3Q8IZP1 549 aaPredicted RBP9.93□□□□□ -0.82
MCF2L-223ENST00000473345 SLC22A18ASQ8N1D0 253 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 KDM1BQ8NB78 822 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 TMEM145Q8NBT3 493 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 AZIN2Q96A70 460 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 ASCL3Q9NQ33 180 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 ANLNQ9NQW6 1124 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 SCML1Q9UN30 329 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 SSUH2Q9Y2M2 353 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 OR51B4Q9Y5P0 310 aa9.93□□□□□ -0.82
MCF2L-223ENST00000473345 KNTC1P50748 2209 aa9.92□□□□□ -0.82
MCF2L-223ENST00000473345 TEX51A0A1B0GUA7 166 aa9.92□□□□□ -0.82
MCF2L-223ENST00000473345 K7ERQ8 282 aa9.92□□□□□ -0.82
MCF2L-223ENST00000473345 M0QYV0 167 aa9.92□□□□□ -0.82
MCF2L-223ENST00000473345 FFAR2O15552 330 aa9.92□□□□□ -0.82
MCF2L-223ENST00000473345 MT-CO1P00395 513 aa9.92□□□□□ -0.82
MCF2L-223ENST00000473345 SRPRAP08240 638 aaKnown RBP9.92□□□□□ -0.82
MCF2L-223ENST00000473345 TACR2P21452 398 aa9.92□□□□□ -0.82
MCF2L-223ENST00000473345 DGKAP23743 735 aa9.92□□□□□ -0.82
MCF2L-223ENST00000473345 SYKP43405 635 aa9.92□□□□□ -0.82
MCF2L-223ENST00000473345 SLC11A2P49281 568 aa9.92□□□□□ -0.82
MCF2L-223ENST00000473345 CLDN2P57739 230 aa9.92□□□□□ -0.82
MCF2L-223ENST00000473345 ST8SIA6P61647 398 aa9.92□□□□□ -0.82
MCF2L-223ENST00000473345 CDH18Q13634 790 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms