RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SPNS2Q8IVW8 549 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 ANKRD52Q8NB46 1076 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 ANLNQ9NQW6 1124 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.6■■□□□ 1.054e-6■■■■□ 26.5
COL18A1-207ENST00000473212 FZD10Q9ULW2 581 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 RPS6KL1Q9Y6S9 549 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 TXNDC9O14530 226 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 RECQL4O94761 1208 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 ETS2P15036 469 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 GRIA2P42262 883 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 IRF9Q00978 393 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 ZBTB6Q15916 424 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 NAPRTQ6XQN6 538 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 ZDHHC17Q8IUH5 632 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 DCLK2Q8N568 766 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 TBC1D30Q9Y2I9 924 aa21.6■■□□□ 1.05
COL18A1-207ENST00000473212 HACD1B0YJ81 288 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 GOLGA8TH3BQL2 631 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 I6L893 689 aaPredicted RBP21.59■■□□□ 1.05
COL18A1-207ENST00000473212 GP5P40197 560 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 ARL4AP40617 200 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 SOX4Q06945 474 aaPredicted RBP21.59■■□□□ 1.05
COL18A1-207ENST00000473212 NAB1Q13506 487 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 PIGZQ86VD9 579 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 GPC2Q8N158 579 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 CERS2Q96G23 380 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 PPP1R36Q96LQ0 422 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 APOL2Q9BQE5 337 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 GORASP1Q9BQQ3 440 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 DMAP1Q9NPF5 467 aaPredicted RBP21.59■■□□□ 1.05
COL18A1-207ENST00000473212 GTF2IRD1Q9UHL9 959 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 ARHGAP26Q9UNA1 814 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 H3BNX3 289 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 HSPA4LO95757 839 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 GNL1P36915 607 aaPredicted RBP21.59■■□□□ 1.05
COL18A1-207ENST00000473212 SNX16P57768 344 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 KLF10Q13118 480 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 LAMC2Q13753 1193 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 GRAMD1BQ3KR37 738 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 ERO1BQ86YB8 467 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 MAPK15Q8TD08 544 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 RNF139Q8WU17 664 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 PCDHB12Q9Y5F1 795 aa21.59■■□□□ 1.05
COL18A1-207ENST00000473212 POLBP06746 335 aa21.58■■□□□ 1.05
COL18A1-207ENST00000473212 GARSP41250 739 aaKnown RBP21.58■■□□□ 1.05
COL18A1-207ENST00000473212 CCR10P46092 362 aa21.58■■□□□ 1.05
COL18A1-207ENST00000473212 BCAT1P54687 386 aa21.58■■□□□ 1.05
COL18A1-207ENST00000473212 MTTPP55157 894 aa21.58■■□□□ 1.05
COL18A1-207ENST00000473212 ARHGAP17Q68EM7 881 aa21.58■■□□□ 1.05
COL18A1-207ENST00000473212 EPGNQ6UW88 154 aa21.58■■□□□ 1.05
COL18A1-207ENST00000473212 CATSPER4Q7RTX7 472 aa21.58■■□□□ 1.05
COL18A1-207ENST00000473212 OPTNQ96CV9 577 aa21.58■■□□□ 1.05
COL18A1-207ENST00000473212 CDH19Q9H159 772 aa21.58■■□□□ 1.05
COL18A1-207ENST00000473212 FAM124BQ9H5Z6 455 aaPredicted RBP21.58■■□□□ 1.05
COL18A1-207ENST00000473212 EIF2B3Q9NR50 452 aaKnown RBP21.58■■□□□ 1.05
COL18A1-207ENST00000473212 STK10O94804 968 aaKnown RBP21.58■■□□□ 1.04
COL18A1-207ENST00000473212 XIAPP98170 497 aa21.58■■□□□ 1.04
COL18A1-207ENST00000473212 PDK3Q15120 406 aa21.58■■□□□ 1.04
COL18A1-207ENST00000473212 CCDC153Q494R4 210 aa21.58■■□□□ 1.04
COL18A1-207ENST00000473212 FBXL19Q6PCT2 694 aa21.58■■□□□ 1.04
COL18A1-207ENST00000473212 KBTBD6Q86V97 674 aa21.58■■□□□ 1.04
COL18A1-207ENST00000473212 NCSTNQ92542 709 aa21.58■■□□□ 1.04
COL18A1-207ENST00000473212 CDY2AQ9Y6F7 541 aa21.58■■□□□ 1.04
COL18A1-207ENST00000473212 CDY1Q9Y6F8 540 aa21.58■■□□□ 1.04
COL18A1-207ENST00000473212 FSCBQ5H9T9 825 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 GRTP1Q5TC63 336 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 PID1Q7Z2X4 250 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 PPTC7Q8NI37 304 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 CPNE1Q99829 537 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 NAT9Q9BTE0 207 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 MATKP42679 507 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 GRM2Q14416 872 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 KYAT1Q16773 422 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 STRA8Q7Z7C7 330 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 OSTM1Q86WC4 334 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 LENG8Q96PV6 779 aaPredicted RBP21.57■■□□□ 1.04
COL18A1-207ENST00000473212 OR52B2Q96RD2 323 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 PIGVQ9NUD9 493 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 INPP5FQ9Y2H2 1132 aa21.57■■□□□ 1.04
COL18A1-207ENST00000473212 MRPL42Q9Y6G3 142 aaKnown RBP21.57■■□□□ 1.04
COL18A1-207ENST00000473212 SERPINB5P36952 375 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 IREB2P48200 963 aaKnown RBP21.56■■□□□ 1.04
COL18A1-207ENST00000473212 DYNC1I2Q13409 638 aaKnown RBP21.56■■□□□ 1.04
COL18A1-207ENST00000473212 FBXO47Q5MNV8 452 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 ICA1LQ8NDH6 482 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 ZNF669Q96BR6 464 aaPredicted RBP21.56■■□□□ 1.04
COL18A1-207ENST00000473212 DCPSQ96C86 337 aaKnown RBP21.56■■□□□ 1.04
COL18A1-207ENST00000473212 MFSD3Q96ES6 412 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 GCNAQ96QF7 691 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 RTKNQ9BST9 563 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 SNX10Q9Y5X0 201 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 GOLGA8QA0A0J9YX86 632 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 GOLGA8OA6NCC3 632 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 KLHL33A6NCF5 533 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 CAPN8A6NHC0 703 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 GOLGA8NF8WBI6 632 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 G3V2L1 256 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 M0QYT0 321 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 CASQ2O14958 399 aaPredicted RBP21.56■■□□□ 1.04
COL18A1-207ENST00000473212 LTFP02788 710 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms