RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SHC2P98077 582 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 SCAPQ12770 1279 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 ENPP2Q13822 863 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 SIM2Q14190 667 aaPredicted RBP13.51□□□□□ -0.25
TPM3-216ENST00000473036 CRY1Q16526 586 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 CA9Q16790 459 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 TXNRD3NBQ6F5E7 133 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 CHST9Q7L1S5 443 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 LONP2Q86WA8 852 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 CCDC112Q8NEF3 446 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 FNIP1Q8TF40 1166 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 NTAN1Q96AB6 310 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 LOXL4Q96JB6 756 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 MRGPRX3Q96LB0 322 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 NUP85Q9BW27 656 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 OSBPL2Q9H1P3 480 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 GPATCH2LQ9NWQ4 482 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 THAP10Q9P2Z0 257 aaPredicted RBP13.51□□□□□ -0.25
TPM3-216ENST00000473036 FZD10Q9ULW2 581 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 TFR2Q9UP52 801 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 RAD54BQ9Y620 910 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 SDK1Q7Z5N4 2213 aa13.51□□□□□ -0.25
TPM3-216ENST00000473036 CEP295Q9C0D2 2601 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.5□□□□□ -0.25
TPM3-216ENST00000473036 A0A1B0GVM2 712 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 TCAF2A6NFQ2 919 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 SRGAP2O75044 1071 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 PRKCHP24723 683 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 MIPP30301 263 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 NRG1Q02297 640 aaPredicted RBP13.5□□□□□ -0.25
TPM3-216ENST00000473036 SEMA3BQ13214 749 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 SRSF5Q13243 272 aaKnown RBP13.5□□□□□ -0.25
TPM3-216ENST00000473036 ZNF234Q14588 700 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 MBLAC2Q68D91 279 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 HEATR6Q6AI08 1181 aaKnown RBP13.5□□□□□ -0.25
TPM3-216ENST00000473036 SCYL2Q6P3W7 929 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 NLRP14Q86W24 1093 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 TMEM139Q8IV31 216 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 ABCA7Q8IZY2 2146 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 ZNF366Q8N895 744 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 SPC24Q8NBT2 197 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 KCNV2Q8TDN2 545 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 TTC17Q96AE7 1141 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 TRIM11Q96F44 468 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 GABRG3Q99928 467 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 SLC6A17Q9H1V8 727 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 OSGEPQ9NPF4 335 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 OR12D3Q9UGF7 316 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 ANGPTL2Q9UKU9 493 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 TBC1D30Q9Y2I9 924 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.5□□□□□ -0.25
TPM3-216ENST00000473036 STON1Q9Y6Q2 735 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 NUP205Q92621 2012 aa13.5□□□□□ -0.25
TPM3-216ENST00000473036 A0A0D9SEW6 157 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 CCDC163A0A0D9SF12 145 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 H0Y626 953 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 AKR1B10O60218 316 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 ATG13O75143 517 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 LRIG2O94898 1065 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 LCA5LO95447 670 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 HLA-EP13747 358 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 NTSR1P30989 418 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 PLEKHG6Q3KR16 790 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 PREPLQ4J6C6 727 aaPredicted RBP13.49□□□□□ -0.25
TPM3-216ENST00000473036 PITRM1Q5JRX3 1037 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 RABGAP1LQ5R372 815 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 IL31Q6EBC2 164 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 PRR23BQ6ZRT6 265 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 TFAP2DQ7Z6R9 452 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 SLFN11Q7Z7L1 901 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 TMTC1Q8IUR5 882 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 AHI1Q8N157 1196 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 CCDC42Q96M95 316 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 PSMB7Q99436 277 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 FEM1AQ9BSK4 669 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 CIPCQ9C0C6 399 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 TMEM245Q9H330 911 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 MTG2Q9H4K7 406 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 CD93Q9NPY3 652 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 PCSK1NQ9UHG2 260 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 REXO2Q9Y3B8 237 aaKnown RBP13.49□□□□□ -0.25
TPM3-216ENST00000473036 PAXBP1Q9Y5B6 917 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 SCINQ9Y6U3 715 aa13.49□□□□□ -0.25
TPM3-216ENST00000473036 SOWAHDA6NJG2 315 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 HRO43593 1189 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 CLDN11O75508 207 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 H2AFZP0C0S5 128 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 GLDCP23378 1020 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 STK19P49842 368 aaPredicted RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 PLK1P53350 603 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 CDH4P55283 916 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 MTA1Q13330 715 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 CDH18Q13634 790 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 EIF4HQ15056 248 aaKnown RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 HSF5Q4G112 596 aaPredicted RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 HS1BP3Q53T59 392 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 TTC39BQ5VTQ0 682 aaPredicted RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 RAD9BQ6WBX8 426 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 H2AFVQ71UI9 128 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 RASSF3Q86WH2 238 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms