RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 EEF2KO00418 725 aaKnown RBP9.42□□□□□ -0.9
PTPRE-207ENST00000471218 DCLK1O15075 740 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 EIF3HO15372 352 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTPRE-207ENST00000471218 DAPK3O43293 454 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 LRP3O75074 770 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 PPFIA2O75334 1257 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 CD48P09326 243 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 GLULP15104 373 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 TSHRP16473 764 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 ATF6P18850 670 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 TFE3P19532 575 aaPredicted RBP9.42□□□□□ -0.9
PTPRE-207ENST00000471218 IVDP26440 423 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 RPL21P46778 160 aaKnown RBP9.42□□□□□ -0.9
PTPRE-207ENST00000471218 EIF3BP55884 814 aaKnown RBP9.42□□□□□ -0.9
PTPRE-207ENST00000471218 TPI1P60174 286 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 COG7P83436 770 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 CDK16Q00536 496 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 TAF10Q12962 218 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 NME3Q13232 169 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 CASP8Q14790 479 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 DDR2Q16832 855 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 RSPO4Q2I0M5 234 aaPredicted RBP9.42□□□□□ -0.9
PTPRE-207ENST00000471218 SLC45A4Q5BKX6 768 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 PPP6R3Q5H9R7 873 aaPredicted RBP9.42□□□□□ -0.9
PTPRE-207ENST00000471218 MANEALQ5VSG8 457 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 KAZNQ674X7 775 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 RHBDF2Q6PJF5 856 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 PRSS55Q6UWB4 352 aaPredicted RBP9.42□□□□□ -0.9
PTPRE-207ENST00000471218 LRIG3Q6UXM1 1119 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 PPP1R21Q6ZMI0 780 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 TRMT10CQ7L0Y3 403 aaKnown RBP9.42□□□□□ -0.9
PTPRE-207ENST00000471218 GSTA5Q7RTV2 222 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 ANKS1BQ7Z6G8 1248 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 CELF5Q8N6W0 485 aaKnown RBP9.42□□□□□ -0.9
PTPRE-207ENST00000471218 ATP6V0D2Q8N8Y2 350 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 LEMD2Q8NC56 503 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 ZBTB44Q8NCP5 570 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 ATG4AQ8WYN0 398 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 DNASE1L2Q92874 299 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 FGF14Q92915 247 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 PSMG2Q969U7 264 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 CLDN23Q96B33 292 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 PLD4Q96BZ4 506 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 MSANTD3Q96H12 275 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 QKIQ96PU8 341 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTPRE-207ENST00000471218 VAT1Q99536 393 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 EPC1Q9H2F5 836 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 PPCSQ9HAB8 311 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 ZNF446Q9NWS9 450 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 TRPM5Q9NZQ8 1165 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 GMIPQ9P107 970 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 OR12D3Q9UGF7 316 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 NFU1Q9UMS0 254 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 MRPS23Q9Y3D9 190 aaKnown RBP9.42□□□□□ -0.9
PTPRE-207ENST00000471218 YIPF1Q9Y548 306 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 CACNA1BQ00975 2339 aa9.42□□□□□ -0.9
PTPRE-207ENST00000471218 DOCK8Q8NF50 2099 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 C2orf16Q68DN1 1984 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 IGLV3-10A0A075B6K4 115 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 C5orf60A6NFR6 353 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 DNALI1O14645 258 aaPredicted RBP9.41□□□□□ -0.9
PTPRE-207ENST00000471218 TLR5O60602 858 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 OPHN1O60890 802 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 GCATO75600 419 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 KRT14P02533 472 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 LRG1P02750 347 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 MYBL2P10244 700 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 RARGP13631 454 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 PTPN2P17706 415 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 CNR2P34972 360 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 ADCY8P40145 1251 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 MLLT6P55198 1093 aaPredicted RBP9.41□□□□□ -0.9
PTPRE-207ENST00000471218 CSTF1Q05048 431 aaKnown RBP9.41□□□□□ -0.9
PTPRE-207ENST00000471218 ADCY2Q08462 1091 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 PRKD1Q15139 912 aaPredicted RBP9.41□□□□□ -0.9
PTPRE-207ENST00000471218 CA9Q16790 459 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 ZC3H12AQ5D1E8 599 aaKnown RBP9.41□□□□□ -0.9
PTPRE-207ENST00000471218 HECTD3Q5T447 861 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 TTC39BQ5VTQ0 682 aaPredicted RBP9.41□□□□□ -0.9
PTPRE-207ENST00000471218 NCBP2-AS2Q69YL0 99 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 PARM1Q6UWI2 310 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 ZDHHC24Q6UX98 284 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 TMC3Q7Z5M5 1100 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 ELMOD1Q8N336 334 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 ZCCHC9Q8N567 271 aaKnown RBP9.41□□□□□ -0.9
PTPRE-207ENST00000471218 KIAA1958Q8N8K9 716 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 IFT81Q8WYA0 676 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 EDEM1Q92611 657 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 IRF7Q92985 503 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 RNF34Q969K3 372 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 E2F7Q96AV8 911 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 ELSPBP1Q96BH3 223 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 HDAC11Q96DB2 347 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 TBC1D31Q96DN5 1066 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 PGLYRP2Q96PD5 576 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 DDX50Q9BQ39 737 aaKnown RBP9.41□□□□□ -0.9
PTPRE-207ENST00000471218 TRIM51Q9BSJ1 452 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 TXLNGYQ9BZA5 131 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 TKTL2Q9H0I9 626 aa9.41□□□□□ -0.9
PTPRE-207ENST00000471218 NMUR1Q9HB89 426 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms