RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SKAP1Q86WV1 359 aa4.68□□□□□ -1.66
COL9A1-206ENST00000470652 ACRBPQ8NEB7 543 aa4.68□□□□□ -1.66
COL9A1-206ENST00000470652 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
COL9A1-206ENST00000470652 PMM1Q92871 262 aa4.68□□□□□ -1.66
COL9A1-206ENST00000470652 SGCZQ96LD1 299 aa4.68□□□□□ -1.66
COL9A1-206ENST00000470652 EIF3CQ99613 913 aaKnown RBP4.68□□□□□ -1.66
COL9A1-206ENST00000470652 ELAC2Q9BQ52 826 aaKnown RBP4.68□□□□□ -1.66
COL9A1-206ENST00000470652 TMEM79Q9BSE2 394 aa4.68□□□□□ -1.66
COL9A1-206ENST00000470652 NLRC4Q9NPP4 1024 aa4.68□□□□□ -1.66
COL9A1-206ENST00000470652 ABHD10Q9NUJ1 306 aa4.68□□□□□ -1.66
COL9A1-206ENST00000470652 ARL8BQ9NVJ2 186 aa4.68□□□□□ -1.66
COL9A1-206ENST00000470652 VPS4AQ9UN37 437 aa4.68□□□□□ -1.66
COL9A1-206ENST00000470652 HEMK1Q9Y5R4 338 aaPredicted RBP4.68□□□□□ -1.66
COL9A1-206ENST00000470652 TJP1Q07157 1748 aa4.68□□□□□ -1.66
COL9A1-206ENST00000470652 ZNF521Q96K83 1311 aa4.68□□□□□ -1.66
COL9A1-206ENST00000470652 MYH14Q7Z406 1995 aaKnown RBP4.67□□□□□ -1.66
COL9A1-206ENST00000470652 TUBGCP6Q96RT7 1819 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 RNMTO43148 476 aaKnown RBP4.67□□□□□ -1.66
COL9A1-206ENST00000470652 MOSPD3O75425 235 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 GLP2RO95838 553 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 TOP3BO95985 862 aaKnown RBP4.67□□□□□ -1.66
COL9A1-206ENST00000470652 SLC3A2P08195 630 aaKnown RBP4.67□□□□□ -1.66
COL9A1-206ENST00000470652 PTGER1P34995 402 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 RBM6P78332 1123 aaKnown RBP4.67□□□□□ -1.66
COL9A1-206ENST00000470652 KPNB1Q14974 876 aaKnown RBP4.67□□□□□ -1.66
COL9A1-206ENST00000470652 ETFDHQ16134 617 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 P3H1Q32P28 736 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 PLEKHO1Q53GL0 409 aaPredicted RBP4.67□□□□□ -1.66
COL9A1-206ENST00000470652 PXDC1Q5TGL8 231 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 ZNF772Q68DY9 489 aaPredicted RBP4.67□□□□□ -1.66
COL9A1-206ENST00000470652 UBE2Q1Q7Z7E8 422 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 TSPYL6Q8N831 410 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 OR52L2PQ8NGH6 319 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 PIGOQ8TEQ8 1089 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 SCARB1Q8WTV0 552 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 GJA10Q969M2 543 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 KIAA1191Q96A73 305 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 SIGLEC11Q96RL6 698 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 STK33Q9BYT3 514 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 VPS16Q9H269 839 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 FNIP2Q9P278 1114 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 DTNAQ9Y4J8 743 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 PCDHB2Q9Y5E7 798 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 PCDHGB2Q9Y5G2 931 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 SIRT4Q9Y6E7 314 aaPredicted RBP4.67□□□□□ -1.66
COL9A1-206ENST00000470652 MRC1P22897 1456 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 KCPQ6ZWJ8 1503 aa4.67□□□□□ -1.66
COL9A1-206ENST00000470652 LY75O60449 1722 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 CCDC187A0A096LP49 1063 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.66□□□□□ -1.66
COL9A1-206ENST00000470652 PNMA6EA0A0J9YXQ4 647 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 PPEF2O14830 753 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 CTIFO43310 598 aaKnown RBP4.66□□□□□ -1.66
COL9A1-206ENST00000470652 NTSR2O95665 410 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 FGBP02675 491 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 CD63P08962 238 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 IFIT2P09913 472 aaKnown RBP4.66□□□□□ -1.66
COL9A1-206ENST00000470652 PLCD1P51178 756 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 CSHL1Q14406 222 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 RAB30Q15771 203 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 Q4G0T1 1027 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 ACSM6Q6P461 480 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 PIK3AP1Q6ZUJ8 805 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 KRT27Q7Z3Y8 459 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 SYTL1Q8IYJ3 562 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 GLMPQ8WWB7 406 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 PIGBQ92521 554 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 AKAP1Q92667 903 aaKnown RBP eCLIP4.66□□□□□ -1.66
COL9A1-206ENST00000470652 COQ8BQ96D53 544 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 P2RY11Q96G91 374 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 ZNF700Q9H0M5 742 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 ARFGAP3Q9NP61 516 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 TNNQ9UQP3 1299 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 TAF1LQ8IZX4 1826 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 PCDH11XQ9BZA7 1347 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 PCDH11YQ9BZA8 1340 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 FANCIQ9NVI1 1328 aa4.66□□□□□ -1.66
COL9A1-206ENST00000470652 COL5A3P25940 1745 aaPredicted RBP4.66□□□□□ -1.66
COL9A1-206ENST00000470652 CEMIPQ8WUJ3 1361 aa4.65□□□□□ -1.66
COL9A1-206ENST00000470652 J3KTA2 159 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 INPPL1O15357 1258 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 DHHO43323 396 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 ABCB4P21439 1286 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 HOXD12P35452 270 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 RPS13P62277 151 aaKnown RBP4.65□□□□□ -1.67
COL9A1-206ENST00000470652 YPEL5P62699 121 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 ID2Q02363 134 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 CFHR1Q03591 330 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 STIM1Q13586 685 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 CBFBQ13951 182 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 ELF2Q15723 593 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 SLC9C1Q4G0N8 1177 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 C1orf141Q5JVX7 400 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 C10orf25Q5T742 122 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 DEF8Q6ZN54 512 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 DEFB132Q7Z7B7 95 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 BCAS4Q8TDM0 211 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 FCRL5Q96RD9 977 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 SENP7Q9BQF6 1050 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 TRNAU1APQ9NX07 287 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms