RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 KIF11P52732 1056 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 NDST1P52848 882 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 CBX1P83916 185 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 CST6Q15828 149 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 SGSM1Q2NKQ1 1148 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 ARL13BQ3SXY8 428 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TBC1D3GQ6DHY5 549 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TBC1D3CQ6IPX1 549 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 NAPEPLDQ6IQ20 393 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 SCARA5Q6ZMJ2 495 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 CLEC20AQ6ZU45 233 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 GPRIN1Q7Z2K8 1008 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 KIAA0907Q7Z7F0 614 aaPredicted RBP9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 ADIPOR2Q86V24 386 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 CCDC117Q8IWD4 279 aaPredicted RBP9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 FAM217AQ8IXS0 508 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 ELOA2Q8IYF1 753 aaPredicted RBP9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 TBC1D3Q8IZP1 549 aaPredicted RBP9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 C12orf29Q8N999 325 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 OR4C6Q8NH72 309 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 OR14C36Q8NHC7 312 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 SMARCE1Q969G3 411 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 CYFIP2Q96F07 1278 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 P2RY11Q96G91 374 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 EPSTI1Q96J88 318 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 PPP1R13BQ96KQ4 1090 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 SLC46A1Q96NT5 459 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 IRX2Q9BZI1 471 aaPredicted RBP9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 KDM4CQ9H3R0 1056 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 USP29Q9HBJ7 922 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 ASCL3Q9NQ33 180 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 FAM49BQ9NUQ9 324 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 ABCB8Q9NUT2 735 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 SERTAD1Q9UHV2 236 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 FBXO2Q9UK22 296 aaPredicted RBP9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 MAN1B1Q9UKM7 699 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 DMTF1Q9Y222 760 aa9.25□□□□□ -0.93
SYNGAP1-205ENST00000470232 ARID1BQ8NFD5 2236 aaPredicted RBP9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 BOD1L1Q8NFC6 3051 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 NEMP2A6NFY4 417 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 HHLA1C9JL84 531 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 MID1O15344 667 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 EIF3DO15371 548 aaKnown RBP eCLIP9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 SLU7O95391 586 aaKnown RBP9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 GJB6O95452 261 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 ADH1BP00325 375 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 ASLP04424 464 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 RPN1P04843 607 aaKnown RBP9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 CKMT1AP12532 417 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 HOXD9P28356 352 aaPredicted RBP9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 SLC8A1P32418 973 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 MLLT3P42568 568 aaPredicted RBP9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 CYP2J2P51589 502 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 SERINC3Q13530 473 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 NCOA4Q13772 614 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 UBAP2LQ14157 1087 aaKnown RBP9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 KANSL1Q7Z3B3 1105 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 SCD5Q86SK9 330 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 VSTM4Q8IW00 320 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 ARL14Q8N4G2 192 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 KDM1BQ8NB78 822 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 ZNF397Q8NF99 534 aaPredicted RBP9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 ZNF516Q92618 1163 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 TAF4BQ92750 862 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 KLHDC7BQ96G42 594 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 CCDC34Q96HJ3 373 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 CCNL2Q96S94 520 aaPredicted RBP9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 DUSP23Q9BVJ7 150 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 ZMYND15Q9H091 742 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 OSBPL2Q9H1P3 480 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 OLA1Q9NTK5 396 aaKnown RBP9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 USP3Q9Y6I4 520 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 USP9XQ93008 2570 aaPredicted RBP9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 AHCTF1Q8WYP5 2266 aa9.24□□□□□ -0.93
SYNGAP1-205ENST00000470232 UNC79Q9P2D8 2635 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 TRIM38O00635 465 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 WNT9AO14904 365 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 CLIC2O15247 247 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 SUV39H1O43463 412 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 RNGTTO60942 597 aaKnown RBP9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 SDC3O75056 442 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 SIN3BO75182 1162 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 LATS1O95835 1130 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 ITGB2P05107 769 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 ATP1A3P13637 1013 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 KRT10P13645 584 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 C5AR1P21730 350 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 STAT6P42226 847 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 SLC8A3P57103 927 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 AMPD3Q01432 767 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 KCNJ12Q14500 433 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 TRIP4Q15650 581 aaPredicted RBP9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 HNRNPA1L2Q32P51 320 aaKnown RBP9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 C3orf38Q5JPI3 329 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 MPP7Q5T2T1 576 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 ADGRF1Q5T601 910 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 E4F1Q66K89 784 aaPredicted RBP9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 USP53Q70EK8 1073 aa9.23□□□□□ -0.93
SYNGAP1-205ENST00000470232 SPATS2Q86XZ4 545 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms