RNA–Protein interactions for RNA: ENST00000469025.1

OPTN-209, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 642 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-209ENST00000469025 PLS3P13797 630 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 HOXB2P14652 356 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 DNAJA1P31689 397 aaKnown RBP5.69□□□□□ -1.5
OPTN-209ENST00000469025 CLCN3P51790 818 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 TFAP4Q01664 338 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 CDC37Q16543 378 aaPredicted RBP5.69□□□□□ -1.5
OPTN-209ENST00000469025 PRR30Q53SZ7 412 aaPredicted RBP5.69□□□□□ -1.5
OPTN-209ENST00000469025 TNNI3KQ59H18 835 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 MIIPQ5JXC2 388 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 PRAMEF14Q5SWL7 426 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 PODNL1Q6PEZ8 512 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 TRIM59Q8IWR1 403 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 ULK2Q8IYT8 1036 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 ADGRG2Q8IZP9 1017 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 OSCP1Q8WVF1 389 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 RRP36Q96EU6 259 aaKnown RBP5.69□□□□□ -1.5
OPTN-209ENST00000469025 FUBP3Q96I24 572 aaKnown RBP eCLIP5.69□□□□□ -1.5
OPTN-209ENST00000469025 ABCG4Q9H172 646 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 ZDHHC4Q9NPG8 344 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 USP36Q9P275 1121 aaKnown RBP5.69□□□□□ -1.5
OPTN-209ENST00000469025 MAFFQ9ULX9 164 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 CCL26Q9Y258 94 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 PCDHA8Q9Y5H6 950 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 SLC4A4Q9Y6R1 1079 aa5.69□□□□□ -1.5
OPTN-209ENST00000469025 TNRC6AQ8NDV7 1962 aaKnown RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 ANKUB1A6NFN9 424 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 MKRN2OSH3BPM6 223 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 PLD2O14939 933 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 VILLO15195 856 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 CSDE1O75534 798 aaKnown RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 FUCA1P04066 466 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 APPP05067 770 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 PRKCBP05771 671 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 THBDP07204 575 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 ATF4P18848 351 aaPredicted RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 HOXA13P31271 388 aaPredicted RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 MLH1P40692 756 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 TNFRSF4P43489 277 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 ARRB1P49407 418 aaPredicted RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 ZNF543Q08ER8 600 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 SART3Q15020 963 aaKnown RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 TTF1Q15361 905 aaPredicted RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 TPGS2Q68CL5 300 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 MBLAC2Q68D91 279 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 GTF2IRD2BQ6EKJ0 949 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 ANKS3Q6ZW76 656 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 TMPRSS9Q7Z410 1059 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 GTF2IRD2Q86UP8 949 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 DCP2Q8IU60 420 aaKnown RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 WDR63Q8IWG1 891 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 SFTPA1Q8IWL2 248 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 CMTM8Q8IZV2 173 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 CNNM3Q8NE01 707 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 PLEKHO2Q8TD55 490 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 IPO4Q8TEX9 1081 aaKnown RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 HASPINQ8TF76 798 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 CHTF18Q8WVB6 975 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 RABGGTAQ92696 567 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 LENG9Q96B70 501 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 GPATCH3Q96I76 525 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 ZNF668Q96K58 619 aaPredicted RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 MRGPRX3Q96LB0 322 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 MRGPRX1Q96LB2 322 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 YTHDC1Q96MU7 727 aaKnown RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 SPATA25Q9BR10 227 aa5.68□□□□□ -1.5
OPTN-209ENST00000469025 ANK3Q12955 4377 aaKnown RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 TDRD6O60522 2096 aaKnown RBP5.68□□□□□ -1.5
OPTN-209ENST00000469025 CACNA1CQ13936 2221 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 CKAP5Q14008 2032 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 DYSFO75923 2080 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 MYOFQ9NZM1 2061 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 PLXNA2O75051 1894 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 ZNF891A8MT65 544 aaPredicted RBP5.67□□□□□ -1.5
OPTN-209ENST00000469025 ADAMTS3O15072 1205 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 MAGEB2O15479 319 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 LRRTM2O43300 516 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 PPP6R2O75170 966 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 KAT7O95251 611 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 F9P00740 461 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 IGLV3-19P01714 112 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 APODP05090 189 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 PDHBP11177 359 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 CKMT1AP12532 417 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 CHMLP26374 656 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 TMOD1P28289 359 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 HTR1EP28566 365 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 OXTRP30559 389 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 TNFSF9P41273 254 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 RXRGP48443 463 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 C21orf59P57076 290 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 RPL10AP62906 217 aaKnown RBP5.67□□□□□ -1.5
OPTN-209ENST00000469025 BFSP1Q12934 665 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 EIF3IQ13347 325 aaKnown RBP5.67□□□□□ -1.5
OPTN-209ENST00000469025 HMBOX1Q6NT76 420 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 CLASRPQ8N2M8 674 aaKnown RBP5.67□□□□□ -1.5
OPTN-209ENST00000469025 GSTCDQ8NEC7 633 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 USP13Q92995 863 aaPredicted RBP5.67□□□□□ -1.5
OPTN-209ENST00000469025 CDHR1Q96JP9 859 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 SCLT1Q96NL6 688 aa5.67□□□□□ -1.5
OPTN-209ENST00000469025 PAAF1Q9BRP4 392 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms