RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 IQCDQ96DY2 449 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 SENP8Q96LD8 212 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 FAM81BQ96LP2 452 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 CCDC42Q96M95 316 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 ZNF560Q96MR9 790 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 PANX2Q96RD6 677 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 TSPAN18Q96SJ8 248 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 GORASP1Q9BQQ3 440 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 MRPL45Q9BRJ2 306 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 COLEC11Q9BWP8 271 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 NAA15Q9BXJ9 866 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 TTYH3Q9C0H2 523 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 SDCBP2Q9H190 292 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 XYLT2Q9H1B5 865 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 HAUS4Q9H6D7 363 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 NHEJ1Q9H9Q4 299 aaPredicted RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 ACSS2Q9NR19 701 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 CISHQ9NSE2 258 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 OXSMQ9NWU1 459 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 THG1LQ9NWX6 298 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 CNOT6Q9ULM6 557 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 PYCARDQ9ULZ3 195 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 SMG5Q9UPR3 1016 aaKnown RBP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 SLC4A7Q9Y6M7 1214 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 PMF1-BGLAPU3KQ54 211 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 CEP350Q5VT06 3117 aa4.32□□□□□ -1.72
TMEM39A-204ENST00000468545 ZNF839A8K0R7 811 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 GRXCR1A8MXD5 290 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 F8VZ95 297 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 ATP2C2O75185 946 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 BAIAP3O94812 1187 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 PLA2G1BP04054 148 aaKnown RBP4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 ITGB1P05556 798 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 GALTP07902 379 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 MMEP08473 750 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 ENO2P09104 434 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 CCDC172P0C7W6 258 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 ODC1P11926 461 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 CPEP16870 476 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 BPIP17213 487 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 ACO1P21399 889 aaKnown RBP4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 LMO2P25791 158 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 AOAHP28039 575 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 LRPAP1P30533 357 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 CYLC1P35663 651 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 PNPLA4P41247 253 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 MAGEA1P43355 309 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 MAGEA10P43363 369 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 LSSP48449 732 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 FNTBP49356 437 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 ALDH7A1P49419 539 aaKnown RBP4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 PDE6CP51160 858 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 KPNA1P52294 538 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 BPIFB4P59827 614 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 IL2P60568 153 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 CCZ1BP86790 482 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 CCZ1P86791 482 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 GCNT1Q02742 428 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 GFPT1Q06210 699 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 SHHQ15465 462 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 NAB2Q15742 525 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 SOWAHAQ2M3V2 549 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 ZNF385BQ569K4 471 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 CATSPEREQ5SY80 951 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 C9orf50Q5SZB4 431 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 CCDC122Q5T0U0 273 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 FAM171A1Q5VUB5 890 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 WDR59Q6PJI9 974 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 CD300LGQ6UXG3 332 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 TMC5Q6UXY8 1006 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 RAD9BQ6WBX8 426 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 LIPIQ6XZB0 460 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 TAS1R1Q7RTX1 841 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 ZNF571Q7Z3V5 609 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 IRF2BP2Q7Z5L9 587 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 ACOT1Q86TX2 421 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 SLC47A2Q86VL8 602 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 DNAAF5Q86Y56 855 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 PASD1Q8IV76 773 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 HERC6Q8IVU3 1022 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 ADGRF2Q8IZF7 708 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 THEM5Q8N1Q8 247 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 LRRC43Q8N309 656 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 C17orf53Q8N3J3 647 aaPredicted RBP4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 PDCL2Q8N4E4 241 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 LRRC52Q8N7C0 313 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 DTX3Q8N9I9 347 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 KYQ8NBH2 561 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 ACRBPQ8NEB7 543 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 UBA3Q8TBC4 463 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 SLC20A1Q8WUM9 679 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 CHTF18Q8WVB6 975 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 HERVK_113Q902F9 699 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 USP7Q93009 1102 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 TMEM176AQ96HP8 235 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 SCYL1Q96KG9 808 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 B3GALT6Q96L58 329 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 UROC1Q96N76 676 aa4.31□□□□□ -1.72
TMEM39A-204ENST00000468545 TWNKQ96RR1 684 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms