RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 PRDM12Q9H4Q4 367 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 SNX15Q9NRS6 342 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 LOC100653049A0A140TA62 436 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 ZNF195O14628 629 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 BUD23O43709 281 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 CCNT2O60583 730 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 KRT34O76011 436 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 SORBS2O94875 1100 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 LYNP07948 512 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 ZCCHC18P0CG32 403 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 HARS2P49590 506 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 ZNF618Q5T7W0 954 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 GRTP1Q5TC63 336 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 FOXB2Q5VYV0 432 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 CST9Q5W186 159 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 RAPH1Q70E73 1250 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 SLC26A7Q8TE54 656 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 HSFY1Q96LI6 401 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 FCRL3Q96P31 734 aaPredicted RBP16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 SNX25Q9H3E2 840 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 FLRT1Q9NZU1 646 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 PDP2Q9P2J9 529 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 GJD2Q9UKL4 321 aa16.16■□□□□ 0.18
TSPAN4-211ENST00000468468 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 MYL4P12829 197 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 ALOX15P16050 662 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 SPANXN3Q5MJ09 141 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 FBXO47Q5MNV8 452 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 SLC27A1Q6PCB7 646 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 CATSPER4Q7RTX7 472 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 ADGRG6Q86SQ4 1221 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 ZNF410Q86VK4 478 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 DCLK2Q8N568 766 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 OR52K1Q8NGK4 314 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 CMTM5Q96DZ9 223 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 CPNE1Q99829 537 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 ASPHQ12797 758 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 CCDC153Q494R4 210 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 DHDDSQ86SQ9 333 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 TP53INP2Q8IXH6 220 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 TNS4Q8IZW8 715 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 CCDC124Q96CT7 223 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 AGAP3Q96P47 875 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 F7P08709 466 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 DEUP1Q05D60 604 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 ADIGQ0VDE8 80 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 PEX6Q13608 980 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 CCNIQ14094 377 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 LRRC36Q1X8D7 754 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 PGM2L1Q6PCE3 622 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 PLD6Q8N2A8 252 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 ACTRT2Q8TDY3 377 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 TRAPPC9Q96Q05 1148 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 OSMRQ99650 979 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 CDH22Q9UJ99 828 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 DOCK3Q8IZD9 2030 aa16.15■□□□□ 0.18
TSPAN4-211ENST00000468468 KPNA7A9QM74 516 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 KCNK1O00180 336 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 SPTLC1O15269 473 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 USP12O75317 370 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 AKAP5P24588 427 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 CUL3Q13618 768 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 CCL14Q16627 93 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 OLFML2BQ68BL8 750 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 STRA8Q7Z7C7 330 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 PIGZQ86VD9 579 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 PSTKQ8IV42 348 aaKnown RBP16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 DEFB107AQ8IZN7 70 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 PHTF2Q8N3S3 785 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 PPP2R3CQ969Q6 453 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 AZIN2Q96A70 460 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 ZNF669Q96BR6 464 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 GBP5Q96PP8 586 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 RBBP8Q99708 897 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 OXCT2Q9BYC2 517 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 ADAMTS10Q9H324 1103 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 NXF3Q9H4D5 531 aaKnown RBP16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 PRDM16Q9HAZ2 1276 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 KLHL8Q9P2G9 620 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 IGSF9Q9P2J2 1179 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 DCXO43602 365 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 ZMPSTE24O75844 475 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 RECQL4O94761 1208 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 FAM163BP0C2L3 166 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 SMIM10L2AP0DMW4 78 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 SMIM10L2BP0DMW5 78 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 YY1P25490 414 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 TKTP29401 623 aaKnown RBP16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 SPRP35270 261 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 CDK7P50613 346 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 HUNKP57058 714 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 NME3Q13232 169 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 CFAP157Q5JU67 520 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 OTUD1Q5VV17 481 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 RNF111Q6ZNA4 994 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 EFCAB3Q8N7B9 438 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 HIPK4Q8NE63 616 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 TUBGCP5Q96RT8 1024 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 EBF3Q9H4W6 596 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 LRRC40Q9H9A6 602 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms