RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 PCDHGA7Q9Y5G6 932 aa4.45□□□□□ -1.7
CPS1-205ENST00000467353 ICE1Q9Y2F5 2266 aa4.45□□□□□ -1.7
CPS1-205ENST00000467353 SPTBN1Q01082 2364 aaKnown RBP4.45□□□□□ -1.7
CPS1-205ENST00000467353 MYLKQ15746 1914 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 ANK1P16157 1881 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 CCDC187A0A096LP49 1063 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 A0A1B0GTH6 734 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 A0A1W2PP55 124 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 LRRC72A6NJI9 287 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 K7ESM1 405 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 PLD2O14939 933 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 HNRNPDLO14979 420 aaKnown RBP4.44□□□□□ -1.7
CPS1-205ENST00000467353 KLF4O43474 513 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 TLR5O60602 858 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 BPNT1O95861 308 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 HGFP14210 728 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 GUCY2CP25092 1073 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 UGT1A5P35504 534 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 KRT2P35908 639 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 HARS2P49590 506 aaKnown RBP4.44□□□□□ -1.7
CPS1-205ENST00000467353 LIG3P49916 1009 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 PDX1P52945 283 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 WDR4P57081 412 aaKnown RBP4.44□□□□□ -1.7
CPS1-205ENST00000467353 PPP2CBP62714 309 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 PPP2CAP67775 309 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 TFAMQ00059 246 aaKnown RBP4.44□□□□□ -1.7
CPS1-205ENST00000467353 STK3Q13188 491 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 EIF4HQ15056 248 aaKnown RBP4.44□□□□□ -1.7
CPS1-205ENST00000467353 MAPRE1Q15691 268 aaKnown RBP4.44□□□□□ -1.7
CPS1-205ENST00000467353 FXNQ16595 210 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 CDKN3Q16667 212 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 FNDC3BQ53EP0 1204 aaKnown RBP4.44□□□□□ -1.7
CPS1-205ENST00000467353 SLC45A4Q5BKX6 768 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 GUSBP11Q6P575 273 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 BLOC1S2Q6QNY1 142 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 RBM44Q6ZP01 1051 aaKnown RBP4.44□□□□□ -1.7
CPS1-205ENST00000467353 USP30Q70CQ3 517 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 EFL1Q7Z2Z2 1120 aaKnown RBP4.44□□□□□ -1.7
CPS1-205ENST00000467353 ANKS1BQ7Z6G8 1248 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 JAMLQ86YT9 394 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 ZC3H3Q8IXZ2 948 aaKnown RBP4.44□□□□□ -1.7
CPS1-205ENST00000467353 CSGALNACT2Q8N6G5 542 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 LRRC52Q8N7C0 313 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 ZSCAN1Q8NBB4 408 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 GOLM1Q8NBJ4 401 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 PHC3Q8NDX5 983 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 PDZD8Q8NEN9 1154 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 OVCA2Q8WZ82 227 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 ITPKCQ96DU7 683 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 ZNF560Q96MR9 790 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 B3GNT5Q9BYG0 378 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 GRIP2Q9C0E4 1043 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 NACA2Q9H009 215 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 LIN7BQ9HAP6 207 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 KLHL11Q9NVR0 708 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 OSER1Q9NX31 292 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 DONSONQ9NYP3 566 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 SIX4Q9UIU6 781 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 KCNG1Q9UIX4 513 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 TUBD1Q9UJT1 453 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 NUDT5Q9UKK9 219 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 PLA2G4CQ9UP65 541 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 DNM3Q9UQ16 869 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 CA5BQ9Y2D0 317 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 KCNMB2Q9Y691 235 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 MTORP42345 2549 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 APCP25054 2843 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 NIPBLQ6KC79 2804 aaeCLIP4.44□□□□□ -1.7
CPS1-205ENST00000467353 TRIP11Q15643 1979 aa4.44□□□□□ -1.7
CPS1-205ENST00000467353 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.43□□□□□ -1.7
CPS1-205ENST00000467353 TMEM238LA0A1B0GVL6 79 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 FAM92AA1XBS5 289 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 TTC24A2A3L6 582 aaPredicted RBP4.43□□□□□ -1.7
CPS1-205ENST00000467353 PP2D1A8MPX8 630 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 K7EM74 188 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 SMAD7O15105 426 aaKnown RBP4.43□□□□□ -1.7
CPS1-205ENST00000467353 SCAMP1O15126 338 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 MDM4O15151 490 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 MID1O15344 667 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 NVLO15381 856 aaKnown RBP4.43□□□□□ -1.7
CPS1-205ENST00000467353 PDPK1O15530 556 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 LATO43561 262 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 DIAPH2O60879 1101 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 VPS4BO75351 444 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 RNASEH2AO75792 299 aaKnown RBP4.43□□□□□ -1.7
CPS1-205ENST00000467353 PIAS2O75928 621 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 NEBLO76041 1014 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 STC2O76061 302 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 RTN3O95197 1032 aaPredicted RBP4.43□□□□□ -1.7
CPS1-205ENST00000467353 LIPCP11150 499 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 XBP1P17861 261 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 PTPN1P18031 435 aaKnown RBP4.43□□□□□ -1.7
CPS1-205ENST00000467353 MAT2AP31153 395 aaKnown RBP4.43□□□□□ -1.7
CPS1-205ENST00000467353 ATP5C1P36542 298 aaKnown RBP4.43□□□□□ -1.7
CPS1-205ENST00000467353 GNL1P36915 607 aaPredicted RBP4.43□□□□□ -1.7
CPS1-205ENST00000467353 ZNF165P49910 485 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 NCKAP1LP55160 1127 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 RPS26P62854 115 aaKnown RBP4.43□□□□□ -1.7
CPS1-205ENST00000467353 RBP5P82980 135 aa4.43□□□□□ -1.7
CPS1-205ENST00000467353 SFSWAPQ12872 951 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms