RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 PDE11AQ9HCR9 933 aa4.78□□□□□ -1.64
LRCH3-211ENST00000466054 MDFICQ9P1T7 246 aa4.78□□□□□ -1.64
LRCH3-211ENST00000466054 KCND3Q9UK17 655 aa4.78□□□□□ -1.64
LRCH3-211ENST00000466054 LZTS1Q9Y250 596 aa4.78□□□□□ -1.64
LRCH3-211ENST00000466054 PCDHA10Q9Y5I2 948 aa4.78□□□□□ -1.64
LRCH3-211ENST00000466054 AGAP5A6NIR3 686 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 SAC3D1A6NKF1 404 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 E5RJQ4 531 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 KRT38O76015 456 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 CNTN5O94779 1100 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 TGM2P21980 687 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 IDUAP35475 653 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 ERV3-1Q14264 604 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 ZNF628Q5EBL2 1059 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 MEX3CQ5U5Q3 659 aaKnown RBP4.77□□□□□ -1.65
LRCH3-211ENST00000466054 ANO7Q6IWH7 933 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 CYP26C1Q6V0L0 522 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 SYT13Q7L8C5 426 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 CERS3Q8IU89 383 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 ADGRF3Q8IZF5 1079 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 TMEM57Q8N5G2 664 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 ENDOVQ8N8Q3 282 aaKnown RBP4.77□□□□□ -1.65
LRCH3-211ENST00000466054 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-211ENST00000466054 BCAS4Q8TDM0 211 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 CSGALNACT1Q8TDX6 532 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 KTI12Q96EK9 354 aaPredicted RBP4.77□□□□□ -1.65
LRCH3-211ENST00000466054 FCRL5Q96RD9 977 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 FAM118BQ9BPY3 351 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 NOD2Q9HC29 1040 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.77□□□□□ -1.65
LRCH3-211ENST00000466054 DERAQ9Y315 318 aa4.77□□□□□ -1.65
LRCH3-211ENST00000466054 CD8B2A6NJW9 211 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 RRHO14718 337 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 DSCR3O14972 297 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 INPPL1O15357 1258 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 BCAR3O75815 825 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 CYP21A2P08686 494 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 RFPL3SP0C7P2 107 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 TGFB3P10600 412 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 AKR1A1P14550 325 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 RPS6KB1P23443 525 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 ZNF268Q14587 947 aaPredicted RBP4.76□□□□□ -1.65
LRCH3-211ENST00000466054 SEC23BQ15437 767 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 ANXA2RQ3ZCQ2 193 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 CTXN3Q4LDR2 81 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 ZNF474Q6S9Z5 364 aaPredicted RBP4.76□□□□□ -1.65
LRCH3-211ENST00000466054 RBM44Q6ZP01 1051 aaKnown RBP4.76□□□□□ -1.65
LRCH3-211ENST00000466054 TFAP2DQ7Z6R9 452 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 UBE2Q1Q7Z7E8 422 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 FAM47BQ8NA70 645 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 USP38Q8NB14 1042 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 CLEC4CQ8WTT0 213 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 MAP4K1Q92918 833 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 RILPL2Q969X0 211 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 ARRDC3Q96B67 414 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 PPP1R10Q96QC0 940 aaKnown RBP4.76□□□□□ -1.65
LRCH3-211ENST00000466054 ABHD14AQ9BUJ0 271 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.76□□□□□ -1.65
LRCH3-211ENST00000466054 CHODLQ9H9P2 273 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 KLHL13Q9P2N7 655 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 ICKQ9UPZ9 632 aa4.76□□□□□ -1.65
LRCH3-211ENST00000466054 H3BNX3 289 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 PLAUP00749 431 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 CD63P08962 238 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 CNPP09543 421 aaKnown RBP4.75□□□□□ -1.65
LRCH3-211ENST00000466054 ALDOCP09972 364 aaKnown RBP4.75□□□□□ -1.65
LRCH3-211ENST00000466054 T-ENOLP0DO92 83 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 TNNT1P13805 278 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 CHN1P15882 459 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 TFEBP19484 476 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 PNPLA4P41247 253 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 SOX2P48431 317 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 HTR6P50406 440 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 SLC12A2P55011 1212 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 RBMS2Q15434 407 aaKnown RBP4.75□□□□□ -1.65
LRCH3-211ENST00000466054 TWIST1Q15672 202 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 TAF12Q16514 161 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 RHPN2Q8IUC4 686 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 PAQR4Q8N4S7 273 aaPredicted RBP4.75□□□□□ -1.65
LRCH3-211ENST00000466054 C16orf52Q8NHV5 167 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 ZFPM2Q8WW38 1151 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 PIGKQ92643 395 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 KAT2BQ92831 832 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 ATP2A3Q93084 1043 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 UBXN10Q96LJ8 280 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 TM2D2Q9BX73 214 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 KRTAP4-4Q9BYR3 166 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 FOXP1Q9H334 677 aaPredicted RBP4.75□□□□□ -1.65
LRCH3-211ENST00000466054 PI4KBQ9UBF8 816 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 RRP7AQ9Y3A4 280 aaKnown RBP4.75□□□□□ -1.65
LRCH3-211ENST00000466054 SQORQ9Y6N5 450 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 LMTK3Q96Q04 1460 aa4.75□□□□□ -1.65
LRCH3-211ENST00000466054 CACNA1IQ9P0X4 2223 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 GRM8O00222 908 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 EIF3FO00303 357 aaPredicted RBP4.74□□□□□ -1.65
LRCH3-211ENST00000466054 NPHP1O15259 732 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 PEPDP12955 493 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 RXRAP19793 462 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 ADPRHP54922 357 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 NANOS2P60321 138 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms