RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 C10orf107Q8IVU9 208 aa19.13■□□□□ 0.65
TSPAN4-210ENST00000464987 PLD6Q8N2A8 252 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-210ENST00000464987 SCAMP5Q8TAC9 235 aa19.13■□□□□ 0.65
TSPAN4-210ENST00000464987 ZNF570Q96NI8 536 aa19.13■□□□□ 0.65
TSPAN4-210ENST00000464987 MTG1Q9BT17 334 aaPredicted RBP19.13■□□□□ 0.65
TSPAN4-210ENST00000464987 CSNK1G1Q9HCP0 422 aa19.13■□□□□ 0.65
TSPAN4-210ENST00000464987 CCDC78A2IDD5 438 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 CAPN15O75808 1086 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 ITGB1P05556 798 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 GNAZP19086 355 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 TYK2P29597 1187 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 CXCR3P49682 368 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 MGAT3Q09327 533 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 ARL13BQ3SXY8 428 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 KHDC1Q4VXA5 237 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 SPANXN3Q5MJ09 141 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 TEDDM1Q5T9Z0 273 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 DCLK2Q8N568 766 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 PPP1R14CQ8TAE6 165 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 ZSCAN18Q8TBC5 510 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 ACMSDQ8TDX5 336 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 USP33Q8TEY7 942 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 N4BP2L2Q92802 583 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 HDAC11Q96DB2 347 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 NAT9Q9BTE0 207 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 CASS4Q9NQ75 786 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 THAP1Q9NVV9 213 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 GOLGA8TH3BQL2 631 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 HNRNPCL1O60812 293 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 MYCNP04198 464 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 SRGAP2BP0DMP2 458 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 GP5P40197 560 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 HCAR3P49019 387 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 PGFP49763 221 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 ALDH18A1P54886 795 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 GALNT2Q10471 571 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 TMEM135Q86UB9 458 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 KIRREL3Q8IZU9 778 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 ACVR1CQ8NER5 493 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 OR10T2Q8NGX3 314 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 RAB3IL1Q8TBN0 382 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 GBA3Q9H227 469 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 CAB39LQ9H9S4 337 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 CHRAC1Q9NRG0 131 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 SNX15Q9NRS6 342 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 TXNDC16Q9P2K2 825 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 DNAJC16Q9Y2G8 782 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 GIT1Q9Y2X7 761 aa19.12■□□□□ 0.65
TSPAN4-210ENST00000464987 PROCP04070 461 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 SLC1A6P48664 564 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 PGGT1BP53609 377 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 TRIM32Q13049 653 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 DLG2Q15700 870 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 HSP90AA5PQ58FG0 334 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 PDZD4Q76G19 769 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 STRA8Q7Z7C7 330 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 GIMAP7Q8NHV1 300 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 DPF3Q92784 378 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 ARHGAP39Q9C0H5 1083 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 SIK2Q9H0K1 926 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 LRRC40Q9H9A6 602 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 PADI3Q9ULW8 664 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 INPP5FQ9Y2H2 1132 aa19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 COL4A4P53420 1690 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 NYNRINQ9P2P1 1898 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-210ENST00000464987 JCHAINP01591 159 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 PCSK1P29120 753 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 UBAP2LQ14157 1087 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 RCN2Q14257 317 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 ANKRD20A4Q4UJ75 823 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 WASHC2DQ5SRD0 308 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 FAM171BQ6P995 826 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 OTOP3Q7RTS5 596 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 SERINC5Q86VE9 423 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 IFNL1Q8IU54 200 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 TNS4Q8IZW8 715 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 DQX1Q8TE96 717 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 WDR60Q8WVS4 1066 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 ZNF419Q96HQ0 510 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 RILPQ96NA2 401 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 RBBP8Q99708 897 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 CPNE1Q99829 537 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 WWP1Q9H0M0 922 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 CHST12Q9NRB3 414 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 BFARQ9NZS9 450 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 DCDC2Q9UHG0 476 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 MYO16Q9Y6X6 1858 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 ARHGAP42A6NI28 874 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 THPOP40225 353 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 IRF9Q00978 393 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 INTS6LQ5JSJ4 861 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 STXBP5Q5T5C0 1151 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 FAM91A1Q658Y4 838 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 PM20D1Q6GTS8 502 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 FSTL4Q6MZW2 842 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 CNTD1Q8N815 330 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 SOCS4Q8WXH5 440 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 TRIB2Q92519 343 aa19.1■□□□□ 0.65
TSPAN4-210ENST00000464987 RNF34Q969K3 372 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms