RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 OSGEPQ9NPF4 335 aa14.92□□□□□ -0.02
SQSTM1-205ENST00000464493 ZSCAN32Q9NX65 697 aa14.92□□□□□ -0.02
SQSTM1-205ENST00000464493 LCMT1Q9UIC8 334 aa14.92□□□□□ -0.02
SQSTM1-205ENST00000464493 AP4E1Q9UPM8 1137 aa14.92□□□□□ -0.02
SQSTM1-205ENST00000464493 PCDHA13Q9Y5I0 950 aa14.92□□□□□ -0.02
SQSTM1-205ENST00000464493 A0A1W2PQF6 199 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 GOLGA6L3A6NEY3 463 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 CREB3O43889 395 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 ALDH1A2O94788 518 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 NDUFA10O95299 355 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 ASLP04424 464 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 RHOCP08134 193 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 RHOQP17081 205 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 PXNP49023 591 aaPredicted RBP14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 FNTBP49356 437 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 ECT2LQ008S8 904 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 SULT2A1Q06520 285 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 DMWDQ09019 674 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 SEMA3BQ13214 749 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 FNDC3BQ53EP0 1204 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 BOLA3Q53S33 107 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 ZC3H14Q6PJT7 736 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 SERPINA13PQ6UXR4 307 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 CYP4V2Q6ZWL3 525 aaPredicted RBP14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 LONP2Q86WA8 852 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 PSTKQ8IV42 348 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 RHOT2Q8IXI1 618 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 ZBTB44Q8NCP5 570 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 ALG14Q96F25 216 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 SNRNP25Q9BV90 132 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 DHX35Q9H5Z1 703 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 GRPEL1Q9HAV7 217 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 LUC7LQ9NQ29 371 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 GPATCH2LQ9NWQ4 482 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 ZNF212Q9UDV6 495 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 EBF1Q9UH73 591 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 VPS28Q9UK41 221 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 ERVW-1Q9UQF0 538 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 PCDHGA2Q9Y5H1 932 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 OR51B4Q9Y5P0 310 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 RAD54BQ9Y620 910 aa14.91□□□□□ -0.02
SQSTM1-205ENST00000464493 CCDC163A0A0D9SF12 145 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 TCRBV21S2A2A0A5A6 115 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 ILVBLA1L0T0 632 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 SYNCRIPO60506 623 aaKnown RBP14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 MTA2O94776 668 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 PROSCO94903 275 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 IPO7O95373 1038 aaKnown RBP14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 SRPRAP08240 638 aaKnown RBP14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 TCF4P15884 667 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 IL1R2P27930 398 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 EPHB2P29323 1055 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 HTR7P34969 479 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 CTSOP43234 321 aaPredicted RBP14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 NUMBP49757 651 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 GSDMDP57764 484 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 ST8SIA6P61647 398 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 NHLH1Q02575 133 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 STARD3Q14849 445 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 TCEAL1Q15170 157 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 CA9Q16790 459 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 ANO7Q6IWH7 933 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 KIAA1211LQ6NV74 962 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 RAD9BQ6WBX8 426 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 ZNF783Q6ZMS7 281 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 NLRP14Q86W24 1093 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 RFFLQ8WZ73 363 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 TMEM245Q9H330 911 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 CATSPERBQ9H7T0 1116 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 ZWILCHQ9H900 591 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 FAM86C1Q9NVL1 165 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 TMEM248Q9NWD8 314 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 NEU3Q9UQ49 428 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 R4GN57 208 aa14.9□□□□□ -0.02
SQSTM1-205ENST00000464493 VPS13AQ96RL7 3174 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 A0A0D9SEW6 157 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 EEF2KO00418 725 aaKnown RBP14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 AXIN1O15169 862 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 ZBTB24O43167 697 aaPredicted RBP14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 EPHX1P07099 455 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 HLA-EP13747 358 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 PRKCHP24723 683 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 ARHGAP25P42331 645 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 SSR1P43307 286 aaKnown RBP14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 MAPKAPK2P49137 400 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 TPI1P60174 286 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 KRT83P78385 493 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 SLC25A11Q02978 314 aaKnown RBP14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 MESDQ14696 234 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 HADHQ16836 314 aaKnown RBP14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 SMTNL2Q2TAL5 461 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 KCNT1Q5JUK3 1230 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 WDR5BQ86VZ2 330 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 RASSF3Q86WH2 238 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 TMEM139Q8IV31 216 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 KDM1BQ8NB78 822 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 TEKT4Q8WW24 435 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 HMGB4Q8WW32 186 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 ERLEC1Q96DZ1 483 aa14.89□□□□□ -0.03
SQSTM1-205ENST00000464493 MYO19Q96H55 970 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms