RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 PLLPQ9Y342 182 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 COQ4Q9Y3A0 265 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 TRPM3Q9HCF6 1732 aaPredicted RBP9.25□□□□□ -0.93
HPS4-208ENST00000464362 MYO18AQ92614 2054 aaKnown RBP9.25□□□□□ -0.93
HPS4-208ENST00000464362 MYH11P35749 1972 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 HEATR9A2RTY3 570 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 C17orf102A2RUQ5 167 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 AP3B1O00203 1094 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 CCL22O00626 93 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 ZSCAN9O15535 394 aaPredicted RBP9.25□□□□□ -0.93
HPS4-208ENST00000464362 GUCA1CO95843 209 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 C2P06681 752 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 BPGMP07738 259 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 ATP6V1B2P21281 511 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 CYP1B1Q16678 543 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 ACSBG2Q5FVE4 666 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 GRTP1Q5TC63 336 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 MARC1Q5VT66 337 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 MRNIPQ6NTE8 343 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 NEPROQ6NW34 567 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 RIN3Q8TB24 985 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 CLEC4CQ8WTT0 213 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 LRRC39Q96DD0 335 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 CPNE1Q99829 537 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 HERPUD2Q9BSE4 406 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 BEGAINQ9BUH8 593 aa9.25□□□□□ -0.93
HPS4-208ENST00000464362 UBE2OQ9C0C9 1292 aaKnown RBP9.25□□□□□ -0.93
HPS4-208ENST00000464362 ZNF536O15090 1300 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 ZNF839A8K0R7 811 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 PYGLP06737 847 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 FAM58BPP0C7Q3 252 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 MPSTP25325 297 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 NR2C2P49116 596 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 OAZ1P54368 228 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 FKBP1AP62942 108 aaKnown RBP9.24□□□□□ -0.93
HPS4-208ENST00000464362 RIPK1Q13546 671 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 PARP6Q2NL67 630 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 CHADLQ6NUI6 762 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 C6orf89Q6UWU4 347 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 CLVS1Q8IUQ0 354 aaPredicted RBP9.24□□□□□ -0.93
HPS4-208ENST00000464362 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.24□□□□□ -0.93
HPS4-208ENST00000464362 HS6ST3Q8IZP7 471 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 C12orf50Q8NA57 414 aaPredicted RBP9.24□□□□□ -0.93
HPS4-208ENST00000464362 FBXO32Q969P5 355 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 FAM162AQ96A26 154 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 ASPSCR1Q9BZE9 553 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 SMPD4Q9NXE4 827 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 ZMYND8Q9ULU4 1186 aaPredicted RBP9.24□□□□□ -0.93
HPS4-208ENST00000464362 PLIN4Q96Q06 1357 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 LMO7Q8WWI1 1683 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 H0Y626 953 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 CBX4O00257 560 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 TRIM16O95361 564 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 CCDC166P0CW27 439 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 CSH1P0DML2 217 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 CSH2P0DML3 217 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 PTPN1P18031 435 aaKnown RBP9.24□□□□□ -0.93
HPS4-208ENST00000464362 INPP1P49441 399 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 RPL14P50914 215 aaKnown RBP9.24□□□□□ -0.93
HPS4-208ENST00000464362 SCNN1GP51170 649 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 ZNF157P51786 506 aaPredicted RBP9.24□□□□□ -0.93
HPS4-208ENST00000464362 ZBTB17Q13105 803 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 LPCAT2Q7L5N7 544 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 DHDDSQ86SQ9 333 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 PSTKQ8IV42 348 aaKnown RBP9.24□□□□□ -0.93
HPS4-208ENST00000464362 OR52K2Q8NGK3 314 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 ZFP42Q96MM3 310 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 CSPG4P5Q96PW8 444 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 SENP6Q9GZR1 1112 aaPredicted RBP9.24□□□□□ -0.93
HPS4-208ENST00000464362 POPDC2Q9HBU9 364 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 SNCAIPQ9Y6H5 919 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 PTPRJQ12913 1337 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 LINC00854A0A1B0GVQ3 168 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 PRPF4O43172 522 aaKnown RBP eCLIP9.24□□□□□ -0.93
HPS4-208ENST00000464362 TPBGLP0DKB5 382 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 ODC1P11926 461 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 GRIA3P42263 894 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 SKIV2L2P42285 1042 aaKnown RBP9.24□□□□□ -0.93
HPS4-208ENST00000464362 ALDH1A3P47895 512 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 CDC42EP1Q00587 391 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 C16orf72Q14CZ0 275 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 NR6A1Q15406 480 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 CCDC153Q494R4 210 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 OVOS1Q6IE37 1185 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 ADGRD1Q6QNK2 874 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 GPR141Q7Z602 305 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 SLC4A11Q8NBS3 891 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 LMO3Q8TAP4 145 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 EXOC2Q96KP1 924 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 NPAS2Q99743 824 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 RERGLQ9H628 205 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 CHRAC1Q9NRG0 131 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 RGS18Q9NS28 235 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 EGFL7Q9UHF1 273 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 TRMT6Q9UJA5 497 aaKnown RBP9.24□□□□□ -0.93
HPS4-208ENST00000464362 CROTQ9UKG9 612 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 SLC12A4Q9UP95 1085 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 HBS1LQ9Y450 684 aaKnown RBP9.24□□□□□ -0.93
HPS4-208ENST00000464362 SNX10Q9Y5X0 201 aa9.24□□□□□ -0.93
HPS4-208ENST00000464362 KIF1AQ12756 1690 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms