RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 FOXO6A8MYZ6 492 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 H7C0C1 242 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 WARSP23381 471 aaKnown RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 PCSK1P29120 753 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 SSTR1P30872 391 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 MSH2P43246 934 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 ATP5OP48047 213 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 HDAC4P56524 1084 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 BASP1P80723 227 aaKnown RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 TSPY1Q01534 308 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 PDE4CQ08493 712 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 BNIP1Q12981 228 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 NFE2Q16621 373 aaPredicted RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 SLC39A12Q504Y0 691 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 SH3PXD2AQ5TCZ1 1133 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 CGB2Q6NT52 195 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 FAM171BQ6P995 826 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 OSTM1Q86WC4 334 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 ANKMY2Q8IV38 441 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 TDRD5Q8NAT2 981 aaKnown RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 PCDH19Q8TAB3 1148 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 SPPL2BQ8TCT7 592 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 ZNF398Q8TD17 642 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 FBF1Q8TES7 1133 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 KBTBD7Q8WVZ9 684 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 ZNF512Q96ME7 567 aaPredicted RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 PGLYRP2Q96PD5 576 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 CRISPLD1Q9H336 500 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 ABCF3Q9NUQ8 709 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 KLHL14Q9P2G3 628 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 ZFP37Q9Y6Q3 630 aaPredicted RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 IQANK1A0A1B0GTG1 560 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 TCRBV7S3A2A0A539 114 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 GOLGA8MH3BSY2 632 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 TRDMT1O14717 391 aaKnown RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 MGRN1O60291 552 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 EDF1O60869 148 aaKnown RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 GCATO75600 419 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 GABBR2O75899 941 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 ZBED1O96006 694 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 TPSB2P20231 275 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 CA4P22748 312 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 FSHRP23945 695 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 LMO2P25791 158 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 GBP2P32456 591 aaPredicted RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 GNL1P36915 607 aaPredicted RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 ALDH1A3P47895 512 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 RGS7P49802 495 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 GAD2Q05329 585 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 SLC18A2Q05940 514 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 TWF1Q12792 350 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 PLD1Q13393 1074 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 RIPK1Q13546 671 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 TPSAB1Q15661 275 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 BBS9Q3SYG4 887 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 PABPC1LQ4VXU2 614 aaKnown RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 INTS6LQ5JSJ4 861 aaKnown RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 SWT1Q5T5J6 900 aaKnown RBP10.18□□□□□ -0.78
PTPRD-207ENST00000463477 CYB5D1Q6P9G0 228 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 NPNTQ6UXI9 565 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 ELMOD1Q8N336 334 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 BANPQ8N9N5 519 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 OR6B3Q8NGW1 331 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 SLC44A1Q8WWI5 657 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 PKMYT1Q99640 499 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 KLC2Q9H0B6 622 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 VPS11Q9H270 941 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 MLXIPLQ9NP71 852 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 EPS15L1Q9UBC2 864 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 LIMD1Q9UGP4 676 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 ZNF180Q9UJW8 692 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 CDH9Q9ULB4 789 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 SLC27A5Q9Y2P5 690 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 YIPF1Q9Y548 306 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 ASB3Q9Y575 518 aa10.18□□□□□ -0.78
PTPRD-207ENST00000463477 DOCK6Q96HP0 2047 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 MYO10Q9HD67 2058 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 A8MXQ7 604 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 HACD1B0YJ81 288 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 ZNF197O14709 1029 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 DCXO43602 365 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 ATP5HO75947 161 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 UBOX5O94941 541 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 IL1BP01584 269 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 RHOP08100 348 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 LAMP2P13473 410 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 SP100P23497 879 aaPredicted RBP10.17□□□□□ -0.78
PTPRD-207ENST00000463477 L1CAMP32004 1257 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 RPA3P35244 121 aaPredicted RBP10.17□□□□□ -0.78
PTPRD-207ENST00000463477 ELK3P41970 407 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 MAGEA3P43357 314 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 EPHB3P54753 998 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 EPHA5P54756 1037 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 NTHL1P78549 312 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 MAPRE1Q15691 268 aaKnown RBP10.17□□□□□ -0.78
PTPRD-207ENST00000463477 CDO1Q16878 200 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 SLC45A4Q5BKX6 768 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 EFHC1Q5JVL4 640 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 HHATQ5VTY9 493 aa10.17□□□□□ -0.78
PTPRD-207ENST00000463477 ICE2Q659A1 982 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms