RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 ZNF510Q9Y2H8 683 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 CES2O00748 559 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 RARAP10276 462 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 BGNP21810 368 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 KDELR1P24390 212 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 NOL9Q5SY16 702 aaKnown RBP13.06□□□□□ -0.32
NUP58-206ENST00000463407 TTC7BQ86TV6 843 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 CPA6Q8N4T0 437 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 MAGEC3Q8TD91 643 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 RSPH1Q8WYR4 309 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 COL14A1Q05707 1796 aaKnown RBP13.06□□□□□ -0.32
NUP58-206ENST00000463407 IGF2BP3O00425 579 aaKnown RBP eCLIP13.06□□□□□ -0.32
NUP58-206ENST00000463407 ZNF862O60290 1169 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 AOC2O75106 756 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 RBL1P28749 1068 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 TRPC1P48995 793 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 ZNF280AP59817 542 aaPredicted RBP13.06□□□□□ -0.32
NUP58-206ENST00000463407 TBX2Q13207 712 aaPredicted RBP13.06□□□□□ -0.32
NUP58-206ENST00000463407 OR5B17Q8NGF7 314 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 OLFM3Q96PB7 478 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 TUBGCP4Q9UGJ1 667 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 DNPEPQ9ULA0 475 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 RWDD3Q9Y3V2 267 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 KRT6AP02538 564 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 KRT6BP04259 564 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 KRT6CP48668 564 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 CRHR2Q13324 411 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 PWP1Q13610 501 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 FBXO39Q8N4B4 442 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 CPNE1Q99829 537 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 NMRAL1Q9HBL8 299 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 PTCH2Q9Y6C5 1203 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 SHPRHQ149N8 1683 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 HNRNPRO43390 633 aaKnown RBP13.05□□□□□ -0.32
NUP58-206ENST00000463407 ABCB1P08183 1280 aaPredicted RBP13.05□□□□□ -0.32
NUP58-206ENST00000463407 IMPDH2P12268 514 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 TFE3P19532 575 aaPredicted RBP13.05□□□□□ -0.32
NUP58-206ENST00000463407 RPL21P46778 160 aaKnown RBP13.05□□□□□ -0.32
NUP58-206ENST00000463407 NR6A1Q15406 480 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 FAM46CQ5VWP2 391 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 CYP20A1Q6UW02 462 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 NPNTQ6UXI9 565 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 C12orf29Q8N999 325 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 NCKIPSDQ9NZQ3 722 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 SH3BP4Q9P0V3 963 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 SIK3Q9Y2K2 1263 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 CRYL1Q9Y2S2 319 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 DERAQ9Y315 318 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 BCL9LQ86UU0 1499 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 RPTORQ8N122 1335 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 NR5A2O00482 541 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 TM9SF1O15321 606 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 RIPK2O43353 540 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 TLR5O60602 858 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 BMP10O95393 424 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 ABL2P42684 1182 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 PLOD1Q02809 727 aaPredicted RBP13.05□□□□□ -0.32
NUP58-206ENST00000463407 NFYCQ13952 458 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 RNF168Q8IYW5 571 aaPredicted RBP13.05□□□□□ -0.32
NUP58-206ENST00000463407 ARNTL2Q8WYA1 636 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 REPS1Q96D71 796 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 DNAJC19Q96DA6 116 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 ZBTB10Q96DT7 871 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 TAS2R14Q9NYV8 317 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 SPATA31C1P0DKV0 1188 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 CRABP2P29373 138 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 SMG7Q92540 1137 aaKnown RBP13.05□□□□□ -0.32
NUP58-206ENST00000463407 CNDP1Q96KN2 507 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 ZMYM5Q9UJ78 669 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 BTN3A1O00481 513 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 USP12O75317 370 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 MAMLD1Q13495 774 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 ATP6AP1LQ52LC2 224 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 AP1ARQ63HQ0 302 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 FAM35AQ86V20 835 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 KATNAL2Q8IYT4 538 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 C10orf88Q9H8K7 445 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 GOLGA2P5Q9HBQ8 144 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 BPIFA1Q9NP55 256 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 CFAP97Q9P2B7 532 aa13.05□□□□□ -0.32
NUP58-206ENST00000463407 ZNF143P52747 638 aaPredicted RBP13.04□□□□□ -0.32
NUP58-206ENST00000463407 ELMO1Q92556 727 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 TADA1Q96BN2 335 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 RASSF9O75901 435 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 THRAP10827 490 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 AQP5P55064 265 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 PARP6Q2NL67 630 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 CXorf40BQ96DE9 158 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 DUSP16Q9BY84 665 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 C16orf96A6NNT2 1141 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 DNTTP04053 509 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 KCNMA1Q12791 1236 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 ECM1Q16610 540 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 ATAT1Q5SQI0 421 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.32
NUP58-206ENST00000463407 PRDM16Q9HAZ2 1276 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 KLRC4O43908 158 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 RRM2P31350 389 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 TRIP10Q15642 601 aa13.04□□□□□ -0.32
NUP58-206ENST00000463407 PPP1R26Q5T8A7 1209 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms