RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SERAC1Q96JX3 654 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 RPL10LQ96L21 214 aaKnown RBP15.88■□□□□ 0.13
SKA3-204ENST00000462482 SPAG5Q96R06 1193 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 FAM129BQ96TA1 746 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 DDIT4Q9NX09 232 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 TOR4AQ9NXH8 423 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 COX16Q9P0S2 106 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 XPO7Q9UIA9 1087 aaKnown RBP15.88■□□□□ 0.13
SKA3-204ENST00000462482 SLC25A13Q9UJS0 675 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 PCNX2A6NKB5 2137 aa15.88■□□□□ 0.13
SKA3-204ENST00000462482 A0A1B0GVM2 712 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 TCAF2A6NFQ2 919 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 MAGEC1O60732 1142 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 DKK1O94907 266 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 LDOC1O95751 146 aaPredicted RBP15.87■□□□□ 0.13
SKA3-204ENST00000462482 ZNF18P17022 549 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 MZF1P28698 734 aaPredicted RBP15.87■□□□□ 0.13
SKA3-204ENST00000462482 HNF1BP35680 557 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 COL9A2Q14055 689 aaPredicted RBP15.87■□□□□ 0.13
SKA3-204ENST00000462482 ARHGAP44Q17R89 818 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 KCNT1Q5JUK3 1230 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 PRPF39Q86UA1 669 aaKnown RBP15.87■□□□□ 0.13
SKA3-204ENST00000462482 APCDD1Q8J025 514 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 CCAR2Q8N163 923 aaKnown RBP15.87■□□□□ 0.13
SKA3-204ENST00000462482 OXR1Q8N573 874 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 PDCD7Q8N8D1 485 aaKnown RBP15.87■□□□□ 0.13
SKA3-204ENST00000462482 OR8D1Q8WZ84 308 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 RPRD1AQ96P16 312 aaPredicted RBP15.87■□□□□ 0.13
SKA3-204ENST00000462482 ORAI3Q9BRQ5 295 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 SYNCQ9H7C4 482 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 RAXQ9Y2V3 346 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 GPSM3Q9Y4H4 160 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 ADAMTS9Q9P2N4 1935 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 CFAP47Q6ZTR5 3102 aa15.87■□□□□ 0.13
SKA3-204ENST00000462482 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.86■□□□□ 0.13
SKA3-204ENST00000462482 TRABD2BA6NFA1 517 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 E9PAM4 449 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 C1QTNF3-AMACRE9PGA6 284 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 ENC1O14682 589 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 HSF2BPO75031 334 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 NUDT1P36639 197 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 STK19P49842 368 aaPredicted RBP15.86■□□□□ 0.13
SKA3-204ENST00000462482 ADPRHP54922 357 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 ZNF177Q13360 481 aaPredicted RBP15.86■□□□□ 0.13
SKA3-204ENST00000462482 PRAMEF14Q5SWL7 426 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 DHRS13Q6UX07 377 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.86■□□□□ 0.13
SKA3-204ENST00000462482 GBP6Q6ZN66 633 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 TMPRSS12Q86WS5 348 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 GATAD2AQ86YP4 633 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 AADATQ8N5Z0 425 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 PTPRN2Q92932 1015 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 CNDP2Q96KP4 475 aaKnown RBP15.86■□□□□ 0.13
SKA3-204ENST00000462482 PPP1R13BQ96KQ4 1090 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 CRACR2AQ9BSW2 395 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 KDM4CQ9H3R0 1056 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 ASNSD1Q9NWL6 643 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 DKK4Q9UBT3 224 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 FARP1Q9Y4F1 1045 aaPredicted RBP15.86■□□□□ 0.13
SKA3-204ENST00000462482 PCDHGA1Q9Y5H4 931 aa15.86■□□□□ 0.13
SKA3-204ENST00000462482 TLR4O00206 839 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 SLC7A4O43246 635 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 IGLV3-25P01717 112 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 C1SP09871 688 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 JUPP14923 745 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 BMP6P22004 513 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 PLK1P53350 603 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 PTK2Q05397 1052 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 CYP4F3Q08477 520 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 CCDC15Q0P6D6 951 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 SMAD1Q15797 465 aaKnown RBP15.85■□□□□ 0.13
SKA3-204ENST00000462482 COL28A1Q2UY09 1125 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 OR6B2Q6IFH4 312 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 NAPEPLDQ6IQ20 393 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 TRIM65Q6PJ69 517 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 CIR1Q86X95 450 aaPredicted RBP15.85■□□□□ 0.13
SKA3-204ENST00000462482 DEFB106AQ8N104 65 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 HNRNPLLQ8WVV9 542 aaKnown RBP15.85■□□□□ 0.13
SKA3-204ENST00000462482 CCDC114Q96M63 670 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 APEX2Q9UBZ4 518 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 CYTH4Q9UIA0 394 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 VPS28Q9UK41 221 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 DMTF1Q9Y222 760 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 CEP192Q8TEP8 1941 aa15.85■□□□□ 0.13
SKA3-204ENST00000462482 CKAP5Q14008 2032 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 FAM149AA5PLN7 773 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 CLDN11O75508 207 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 RFPL3O75679 317 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 KRT9P35527 623 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 NME3Q13232 169 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 KCNJ12Q14500 433 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 STAT4Q14765 748 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 TAF5Q15542 800 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 TPD52L1Q16890 204 aaPredicted RBP15.84■□□□□ 0.13
SKA3-204ENST00000462482 EXOC3L4Q17RC7 722 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 SMYD5Q6GMV2 418 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 FBXL22Q6P050 247 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 C11orf57Q6ZUT1 292 aaPredicted RBP15.84■□□□□ 0.13
SKA3-204ENST00000462482 PDZD3Q86UT5 571 aa15.84■□□□□ 0.13
SKA3-204ENST00000462482 EID2Q8N6I1 236 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms