RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 LOC100653049A0A140TA62 436 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 TXNDC9O14530 226 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 PRPF4O43172 522 aaKnown RBP eCLIP15.76■□□□□ 0.114e-13■■■■■ 43.3
LMNB1-203ENST00000460265 KRT34O76011 436 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 SLC4A1P02730 911 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 AQP5P55064 265 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 COG7P83436 770 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 LRRC36Q1X8D7 754 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 EML3Q32P44 896 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 NXNQ6DKJ4 435 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 KLC3Q6P597 504 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 RNF135Q8IUD6 432 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 HAPLN3Q96S86 360 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 C20orf96Q9NUD7 363 aaPredicted RBP15.76■□□□□ 0.11
LMNB1-203ENST00000460265 PIGVQ9NUD9 493 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 SLC38A7Q9NVC3 462 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 OR12D3Q9UGF7 316 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 TEX264Q9Y6I9 313 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 PSME4Q14997 1843 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 RBBP6Q7Z6E9 1792 aaKnown RBP15.76■□□□□ 0.11
LMNB1-203ENST00000460265 A0A0A0MRY4 1105 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 TM9SF1O15321 606 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 POLBP06746 335 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 DSG1Q02413 1049 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 BST1Q10588 318 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 HIC1Q14526 733 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 CAND1Q86VP6 1230 aaKnown RBP15.76■□□□□ 0.11
LMNB1-203ENST00000460265 TDRPQ86YL5 185 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 ZBTB8BQ8NAP8 495 aaPredicted RBP15.76■□□□□ 0.11
LMNB1-203ENST00000460265 SPATA13Q96N96 652 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 ADAM2Q99965 735 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 SIKE1Q9BRV8 207 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 PRM3Q9NNZ6 103 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 ZNF212Q9UDV6 495 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 MYADML2A6NDP7 307 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 MDM4O15151 490 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 LTFP02788 710 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 OR4Q2P0C623 313 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 GARSP41250 739 aaKnown RBP15.76■□□□□ 0.11
LMNB1-203ENST00000460265 GALK1P51570 392 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 KCNJ11Q14654 390 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 TNFAIP8L3Q5GJ75 292 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 C6orf163Q5TEZ5 329 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 CDHR3Q6ZTQ4 885 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 KBTBD2Q8IY47 623 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 ZFYVE28Q9HCC9 887 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 NMRK2Q9NPI5 230 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 STX18Q9P2W9 335 aaKnown RBP15.76■□□□□ 0.11
LMNB1-203ENST00000460265 SH3GLB1Q9Y371 365 aa15.76■□□□□ 0.11
LMNB1-203ENST00000460265 XPO1O14980 1071 aaKnown RBP15.75■□□□□ 0.11
LMNB1-203ENST00000460265 GABBR2O75899 941 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 AKR1A1P14550 325 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 PCSK1P29120 753 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 AXLP30530 894 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 AVPR1AP37288 418 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 OR1G1P47890 313 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 GJA8P48165 433 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 GLRBP48167 497 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 PPM1JQ5JR12 505 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 MFSD14CQ5VZR4 134 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 CMC1Q7Z7K0 106 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 IFNLR1Q8IU57 520 aaPredicted RBP15.75■□□□□ 0.11
LMNB1-203ENST00000460265 RELL1Q8IUW5 271 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 BANPQ8N9N5 519 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 FAM161BQ96MY7 647 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 BTBD10Q9BSF8 475 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 NACA2Q9H009 215 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 CYP4F11Q9HBI6 524 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 TYROBPO43914 113 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 CD151P48509 253 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 NR2C2P49116 596 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 TSPY1Q01534 308 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 PRPSAP1Q14558 356 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 N4BP2L1Q5TBK1 243 aaPredicted RBP15.75■□□□□ 0.11
LMNB1-203ENST00000460265 IL31Q6EBC2 164 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 CLEC20AQ6ZU45 233 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 ZNF554Q86TJ5 538 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 TTC7BQ86TV6 843 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 WDR75Q8IWA0 830 aaKnown RBP15.75■□□□□ 0.11
LMNB1-203ENST00000460265 CXorf38Q8TB03 319 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 GPR152Q8TDT2 470 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 CIDEBQ9UHD4 219 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 TLK1Q9UKI8 766 aa15.75■□□□□ 0.11
LMNB1-203ENST00000460265 BCLAF3A2AJT9 711 aaKnown RBP15.74■□□□□ 0.11
LMNB1-203ENST00000460265 B2RBV5 119 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 SPATA2LQ8IUW3 424 aaPredicted RBP15.74■□□□□ 0.11
LMNB1-203ENST00000460265 TNS4Q8IZW8 715 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 NCSTNQ92542 709 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 MIPEPQ99797 713 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 WDR83Q9BRX9 315 aaKnown RBP15.74■□□□□ 0.11
LMNB1-203ENST00000460265 SYBUQ9NX95 663 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 MORF4L1Q9UBU8 362 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 SFMBT1Q9UHJ3 866 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 GJD2Q9UKL4 321 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 SLC39A10Q9ULF5 831 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 FAM72CH0Y354 149 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 PIRO00625 290 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 GSC2O15499 205 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 ADRA1BP35368 520 aa15.74■□□□□ 0.11
LMNB1-203ENST00000460265 CYLC2Q14093 348 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms