RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 TTC30BQ8N4P2 665 aa15.05■□□□□ -0
PTPRU-205ENST00000460170 OTUB1Q96FW1 271 aaPredicted RBP15.05■□□□□ -0
PTPRU-205ENST00000460170 DEAF1O75398 565 aaPredicted RBP15.04■□□□□ -0
PTPRU-205ENST00000460170 SERPIND1P05546 499 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 MYL4P12829 197 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 RAG1P15918 1043 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 PREPLQ4J6C6 727 aaPredicted RBP15.04■□□□□ -0
PTPRU-205ENST00000460170 TREML2Q5T2D2 321 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 FAM9CQ8IZT9 166 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 SPATA17Q96L03 361 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 NUDT5Q9UKK9 219 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 ATXN2Q99700 1313 aaKnown RBP15.04■□□□□ -0
PTPRU-205ENST00000460170 FGF10O15520 208 aaPredicted RBP15.04■□□□□ -0
PTPRU-205ENST00000460170 LRCH4O75427 683 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 HOXB8P17481 243 aaPredicted RBP15.04■□□□□ -0
PTPRU-205ENST00000460170 NFKB1P19838 968 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 ATP6V1E1P36543 226 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 SKIV2L2P42285 1042 aaKnown RBP15.04■□□□□ -0
PTPRU-205ENST00000460170 PLK1P53350 603 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 XRCC4Q13426 336 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 ANKS6Q68DC2 871 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 TSHZ1Q6ZSZ6 1077 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 P3H2Q8IVL5 708 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 ZNF184Q99676 751 aaPredicted RBP15.04■□□□□ -0
PTPRU-205ENST00000460170 TMEM161AQ9NX61 479 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 MRASO14807 208 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 MSLNQ13421 630 aaPredicted RBP15.04■□□□□ -0
PTPRU-205ENST00000460170 NR6A1Q15406 480 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 SLC39A12Q504Y0 691 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 FAM171A1Q5VUB5 890 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 ZFP1Q6P2D0 407 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 LBX2Q6XYB7 198 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 LRRN4Q8WUT4 740 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 SOCS4Q8WXH5 440 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 MID1IP1Q9NPA3 183 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 SYNDIG1LA6NDD5 238 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 ERCC2P18074 760 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 PTGIRP43119 386 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 SLC20A2Q08357 652 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 OASLQ15646 514 aaKnown RBP15.04■□□□□ -0
PTPRU-205ENST00000460170 OLFML2BQ68BL8 750 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 LCLAT1Q6UWP7 414 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 PLD3Q8IV08 490 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 SHISA4Q96DD7 197 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 POMKQ9H5K3 350 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 ATP13A1Q9HD20 1204 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 COQ4Q9Y3A0 265 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 MRPL42Q9Y6G3 142 aaKnown RBP15.04■□□□□ -0
PTPRU-205ENST00000460170 SLIT2O94813 1529 aa15.04■□□□□ -0
PTPRU-205ENST00000460170 M0R3G1 203 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 FCGR1AP12314 374 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 CDKN2BP42772 138 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 SERPINH1P50454 418 aaKnown RBP15.03■□□□□ -0
PTPRU-205ENST00000460170 IRGCQ6NXR0 463 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 TBC1D19Q8N5T2 526 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 NTPCRQ9BSD7 190 aaKnown RBP15.03■□□□□ -0
PTPRU-205ENST00000460170 STARD7Q9NQZ5 370 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 POLG2Q9UHN1 485 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 CDH9Q9ULB4 789 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 CLUHO75153 1309 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 SNED1Q8TER0 1413 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 MANSC4A6NHS7 340 aaPredicted RBP15.03■□□□□ -0
PTPRU-205ENST00000460170 CYP1A1P04798 512 aaPredicted RBP15.03■□□□□ -0
PTPRU-205ENST00000460170 ITGA2BP08514 1039 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 NCALDP61601 193 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 SPIRE1Q08AE8 756 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 TBCELQ5QJ74 424 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 GPR141Q7Z602 305 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 XYLT1Q86Y38 959 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 ADAM2Q99965 735 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 RMND5AQ9H871 391 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 SPASTQ9UBP0 616 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 AJAP1Q9UKB5 411 aaPredicted RBP15.03■□□□□ -0
PTPRU-205ENST00000460170 AP4S1Q9Y587 144 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 A0A087X1B8 175 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 BIRC5O15392 142 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 ARRDC4Q8NCT1 418 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 PPP1R13LQ8WUF5 828 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 CCDC167Q9P0B6 97 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 TEKT2Q9UIF3 430 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 MAFBQ9Y5Q3 323 aaPredicted RBP15.03■□□□□ -0
PTPRU-205ENST00000460170 CILPO75339 1184 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 RIPOR1Q6ZS17 1223 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 DAW1Q8N136 415 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 OR6Y1Q8NGX8 325 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 SH3GL1Q99961 368 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 SLC25A23Q9BV35 468 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 PCDHGC3Q9UN70 934 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 NDUFAF1Q9Y375 327 aa15.03■□□□□ -0
PTPRU-205ENST00000460170 ENTPD5O75356 428 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 RTN3O95197 1032 aaPredicted RBP15.02■□□□□ -0
PTPRU-205ENST00000460170 APOA1P02647 267 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 HIRAP54198 1017 aaPredicted RBP15.02■□□□□ -0
PTPRU-205ENST00000460170 YAF2Q8IY57 180 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 MRPL45Q9BRJ2 306 aaKnown RBP15.02■□□□□ -0
PTPRU-205ENST00000460170 BCAS3Q9H6U6 928 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 XPNPEP1Q9NQW7 623 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 MAPK1P28482 360 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 MZF1P28698 734 aaPredicted RBP15.02■□□□□ -0
PTPRU-205ENST00000460170 MRPS5P82675 430 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms