RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 PDGFRAP16234 1089 aa16.56■□□□□ 0.24
GPC1-206ENST00000455111 SLC8A1P32418 973 aa16.56■□□□□ 0.24
GPC1-206ENST00000455111 ECT2LQ008S8 904 aa16.56■□□□□ 0.24
GPC1-206ENST00000455111 PROSER1Q86XN7 944 aa16.56■□□□□ 0.24
GPC1-206ENST00000455111 ZNF683Q8IZ20 524 aa16.56■□□□□ 0.24
GPC1-206ENST00000455111 KIAA1522Q9P206 1035 aaPredicted RBP16.56■□□□□ 0.24
GPC1-206ENST00000455111 PCDHB9Q9Y5E1 797 aa16.56■□□□□ 0.24
GPC1-206ENST00000455111 SNX10Q9Y5X0 201 aa16.56■□□□□ 0.24
GPC1-206ENST00000455111 CABIN1Q9Y6J0 2220 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 SYNJ2BP-COX16A0A087WUM0 186 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 TARSL2A2RTX5 802 aaKnown RBP16.55■□□□□ 0.24
GPC1-206ENST00000455111 FAM47DPA6NHR8 397 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 CBX4O00257 560 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 FOXN3O00409 490 aaPredicted RBP16.55■□□□□ 0.24
GPC1-206ENST00000455111 CAPN9O14815 690 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 FLRT2O43155 660 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 MED7O43513 233 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 RNASEH2AO75792 299 aaKnown RBP16.55■□□□□ 0.24
GPC1-206ENST00000455111 APOEP02649 317 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 PSMD8P48556 350 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 PLK1P53350 603 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 ADPRHP54922 357 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 KCNMA1Q12791 1236 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 TTC31Q49AM3 519 aaPredicted RBP16.55■□□□□ 0.24
GPC1-206ENST00000455111 MIIPQ5JXC2 388 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 TRNP1Q6NT89 227 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 IL27RAQ6UWB1 636 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 ENOSF1Q7L5Y1 443 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 SLC47A2Q86VL8 602 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 RHBDD1Q8TEB9 315 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 PPP1R13BQ96KQ4 1090 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 DDX50Q9BQ39 737 aaKnown RBP16.55■□□□□ 0.24
GPC1-206ENST00000455111 TMPRSS4Q9NRS4 437 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.55■□□□□ 0.24
GPC1-206ENST00000455111 ASNSD1Q9NWL6 643 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 COX16Q9P0S2 106 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 ARHGAP20Q9P2F6 1191 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 HS3ST4Q9Y661 456 aa16.55■□□□□ 0.24
GPC1-206ENST00000455111 A0A1B0GTQ1 180 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 EDDM13A0A1B0GTR0 161 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 VILLO15195 856 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 CNTN5O94779 1100 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 USP8P40818 1118 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 CLDN6P56747 220 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 ST8SIA6P61647 398 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 CAMK2BQ13554 666 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 AUHQ13825 339 aaKnown RBP16.54■□□□□ 0.24
GPC1-206ENST00000455111 C5orf22Q49AR2 442 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 GBP6Q6ZN66 633 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 TMPRSS7Q7RTY8 843 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 GATAD2AQ86YP4 633 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 ZNF557Q8N988 423 aaPredicted RBP16.54■□□□□ 0.24
GPC1-206ENST00000455111 MDM1Q8TC05 714 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 PSMB7Q99436 277 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 PIGVQ9NUD9 493 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 DDIT4Q9NX09 232 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 DNAJC12Q9UKB3 198 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 FZD4Q9ULV1 537 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 SCML1Q9UN30 329 aa16.54■□□□□ 0.24
GPC1-206ENST00000455111 GTPBP10A4D1E9 387 aaKnown RBP16.53■□□□□ 0.24
GPC1-206ENST00000455111 GOLGA8CPA6NN73 597 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 F5H5T6 163 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 PCDHGA12O60330 932 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 DAB1O75553 588 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 ADCY5O95622 1261 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 RACK1P63244 317 aaKnown RBP16.53■□□□□ 0.24
GPC1-206ENST00000455111 EXOC3L4Q17RC7 722 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 ALFQ53S48 1182 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 ATP6V0D2Q8N8Y2 350 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 OR2T34Q8NGX1 318 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 NPY6RQ99463 290 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 FAM204AQ9H8W3 233 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 VANGL2Q9ULK5 521 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 LOC400499M0QZD8 3231 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 MYLKQ15746 1914 aa16.53■□□□□ 0.24
GPC1-206ENST00000455111 CHD5Q8TDI0 1954 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 A0A1B0GVM2 712 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 TYW5A2RUC4 315 aaKnown RBP16.52■□□□□ 0.24
GPC1-206ENST00000455111 FAM149AA5PLN7 773 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 TCAF2A6NFQ2 919 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 LATO43561 262 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 HSF2BPO75031 334 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 RTN2O75298 545 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 PAGE1O75459 146 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 MT-CO1P00395 513 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 CTSLP07711 333 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 GLI1P08151 1106 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 CCT8P50990 548 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 TAS2R38P59533 333 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 SLC6A3Q01959 620 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 DPCR1Q3MIW9 517 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 RAB6CQ53S08 254 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 HSP90AA4PQ58FG1 418 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 OR6B2Q6IFH4 312 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 SLC26A9Q7LBE3 791 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 KANSL1Q7Z3B3 1105 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 SPATS2Q86XZ4 545 aaKnown RBP16.52■□□□□ 0.24
GPC1-206ENST00000455111 CREBRFQ8IUR6 639 aa16.52■□□□□ 0.24
GPC1-206ENST00000455111 ZNF397Q8NF99 534 aaPredicted RBP16.52■□□□□ 0.24
GPC1-206ENST00000455111 GANCQ8TET4 914 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms