RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 PRICKLE3O43900 615 aaPredicted RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMPRSS11DO60235 418 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 ZNF623O75123 536 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 ENTPD3O75355 529 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TSPAN9O75954 239 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 SEC14L2O76054 403 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 SEC31AO94979 1220 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 PDE8BO95263 885 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 CCNDBP1O95273 360 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 EIF2S1P05198 315 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 ATF7P17544 494 aaPredicted RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 FPR3P25089 353 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 PTPN9P43378 593 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 RPS6KA3P51812 740 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 PPP5CP53041 499 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 CEBPZQ03701 1054 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 CCDC15Q0P6D6 951 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 IL13RA2Q14627 380 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 ICAM4Q14773 271 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 RASA2Q15283 850 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 RNASE12Q5GAN4 147 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 KIAA0895LQ68EN5 471 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 CDC73Q6P1J9 531 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 NCEH1Q6PIU2 408 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM200AQ86VY9 491 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 C17orf53Q8N3J3 647 aaPredicted RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 SIRT6Q8N6T7 355 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 ENDOVQ8N8Q3 282 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM116Q8NCL8 245 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TOR1AIP2Q8NFQ8 470 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 FAM110DQ8TAY7 271 aaPredicted RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 SCFD2Q8WU76 684 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 EDAQ92838 391 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 INTS12Q96CB8 462 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 SAAL1Q96ER3 474 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 FEM1CQ96JP0 617 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 GPR78Q96P69 363 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TTC12Q9H892 705 aaPredicted RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 USP29Q9HBJ7 922 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 CD248Q9HCU0 757 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 MPP6Q9NZW5 540 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 PEMTQ9UBM1 199 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 LIMA1Q9UHB6 759 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 AMFRQ9UKV5 643 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 INTS6Q9UL03 887 aaKnown RBP4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 SUFUQ9UMX1 484 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM5Q9Y2B1 443 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 PKP3Q9Y446 797 aa4.51□□□□□ -1.69
HMGN3P1-201ENST00000453847 TEX13CA0A0J9YWL9 993 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PABPN1LA6NDY0 278 aaKnown RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 DSCR3O14972 297 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CYP27B1O15528 508 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 TACC1O75410 805 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 ONECUT2O95948 504 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 TUBBP07437 444 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CHRM2P08172 466 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CHRM4P08173 479 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 C1SP09871 688 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 ALDOCP09972 364 aaKnown RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 RFPL3SP0C7P2 107 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CYP4B1P13584 511 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 SELLP14151 372 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PKMP14618 531 aaKnown RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 MATN1P21941 496 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 GJC1P36383 396 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CPOXP36551 454 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 NNMTP40261 264 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 RAP1GAPP47736 663 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 ZNF84P51523 738 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PDE1AP54750 535 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 SNX16P57768 344 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 TXNL4AP83876 142 aaKnown RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 ZBTB16Q05516 673 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 NEXNQ0ZGT2 675 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PUM1Q14671 1186 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PTPRRQ15256 657 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 NAA16Q6N069 864 aaPredicted RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM81Q6P7N7 255 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 KLHL35Q6PF15 583 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CLEC17AQ6ZS10 378 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PARS2Q7L3T8 475 aaKnown RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 MDGA2Q7Z553 956 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 GALNT7Q86SF2 657 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 LINC01465Q8N7H1 131 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 KCTD6Q8NC69 237 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 ASB10Q8WXI3 467 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 AKAP1Q92667 903 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 ARHGEF2Q92974 986 aaKnown RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 KLHL29Q96CT2 875 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 FAM89AQ96GI7 184 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 PGBD1Q96JS3 809 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CMTM3Q96MX0 182 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 CINPQ9BW66 212 aaPredicted RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 GATA5Q9BWX5 397 aaPredicted RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 NPLQ9BXD5 320 aaPredicted RBP4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 TRIM31Q9BZY9 425 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 NDST4Q9H3R1 872 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 DUSP22Q9NRW4 184 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 TMEM248Q9NWD8 314 aa4.5□□□□□ -1.69
HMGN3P1-201ENST00000453847 EHD3Q9NZN3 535 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms