RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 MPP7Q5T2T1 576 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 FAM102AQ5T9C2 384 aaPredicted RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 PEAR1Q5VY43 1037 aaPredicted RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 RNF219Q5W0B1 726 aaPredicted RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 KIAA0907Q7Z7F0 614 aaPredicted RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 METTL3Q86U44 580 aaKnown RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 FAM71AQ8IYT1 594 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 APCDD1Q8J025 514 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 CCAR2Q8N163 923 aaKnown RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 HDDC3Q8N4P3 179 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 MINDY1Q8N5J2 469 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 ZNF557Q8N988 423 aaPredicted RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 FIBINQ8TAL6 211 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 FOXJ1Q92949 421 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 ZNF419Q96HQ0 510 aaPredicted RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 RPL10LQ96L21 214 aaKnown RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 PCMTD1Q96MG8 357 aaPredicted RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 RPRD1AQ96P16 312 aaPredicted RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 SLC2A13Q96QE2 648 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 NUP58Q9BVL2 599 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 SIK2Q9H0K1 926 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 CAPN10Q9HC96 672 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 NLRC4Q9NPP4 1024 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 ITM2CQ9NQX7 267 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 FAM207AQ9NSI2 230 aaPredicted RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.96□□□□□ -0.98
RFX3-209ENST00000451859 SLC12A6Q9UHW9 1150 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 EIF2B4Q9UI10 523 aaKnown RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 ERVW-1Q9UQF0 538 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 SNX10Q9Y5X0 201 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 AKAP13Q12802 2813 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 TRPM6Q9BX84 2022 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 TTC34A8MYJ7 566 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 F8VZ95 297 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 GOLGA6L22H0YM25 854 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 OPHN1O60890 802 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 GFPT2O94808 682 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 FSBPO95073 299 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 ASLP04424 464 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 TPM2P07951 284 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 GLI1P08151 1106 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 SYPP08247 313 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 MMEP08473 750 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 UCHL3P15374 230 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 TFE3P19532 575 aaPredicted RBP8.95□□□□□ -0.98
RFX3-209ENST00000451859 MZF1P28698 734 aaPredicted RBP8.95□□□□□ -0.98
RFX3-209ENST00000451859 OXTRP30559 389 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 HOXD12P35452 270 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 PSMD8P48556 350 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 SNX16P57768 344 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 BPIFB4P59827 614 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 GRIK2Q13002 908 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 TTC31Q49AM3 519 aaPredicted RBP8.95□□□□□ -0.98
RFX3-209ENST00000451859 RABGAP1LQ5R372 815 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 ZNF776Q68DI1 518 aaPredicted RBP8.95□□□□□ -0.98
RFX3-209ENST00000451859 DPY19L2P1Q6NXN4 242 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 BRICD5Q6PL45 260 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 SASS6Q6UVJ0 657 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 BEND5Q7L4P6 421 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 RABEPKQ7Z6M1 372 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 PHLDB2Q86SQ0 1253 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 NOP9Q86U38 636 aaKnown RBP8.95□□□□□ -0.98
RFX3-209ENST00000451859 ERICH1Q86X53 443 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 TMEM35BQ8NCS4 154 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 SLC20A1Q8WUM9 679 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 CPA5Q8WXQ8 436 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 IGSF8Q969P0 613 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 LMLNQ96KR4 655 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 MRGPRX3Q96LB0 322 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 C6orf106Q9H6K1 298 aaPredicted RBP8.95□□□□□ -0.98
RFX3-209ENST00000451859 FANCLQ9NW38 375 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 KIAA1522Q9P206 1035 aaPredicted RBP8.95□□□□□ -0.98
RFX3-209ENST00000451859 SUSD2Q9UGT4 822 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 SUN2Q9UH99 717 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 SLCO3A1Q9UIG8 710 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 HS3ST4Q9Y661 456 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 SPEGQ15772 3267 aa8.95□□□□□ -0.98
RFX3-209ENST00000451859 CEP295Q9C0D2 2601 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 A0A1B0GTW7 788 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 A0A1B0GVM2 712 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 SPAARA0A1B0GVQ0 90 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 A0A1W2PP55 124 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 TCAF2A6NFQ2 919 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 METTL12A8MUP2 240 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 EPHB6O15197 1021 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 MID1O15344 667 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 BCAT2O15382 392 aaPredicted RBP8.94□□□□□ -0.98
RFX3-209ENST00000451859 BNIP3LO60238 219 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 PAGE1O75459 146 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 SEMA4FO95754 770 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 SLC2A3P11169 496 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 VAV1P15498 845 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 SPINK2P20155 84 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 NOS2P35228 1153 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 POLR2FP61218 127 aaKnown RBP8.94□□□□□ -0.98
RFX3-209ENST00000451859 ECT2LQ008S8 904 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 AUHQ13825 339 aaKnown RBP8.94□□□□□ -0.98
RFX3-209ENST00000451859 STX1AQ16623 288 aa8.94□□□□□ -0.98
RFX3-209ENST00000451859 HNRNPA1L2Q32P51 320 aaKnown RBP8.94□□□□□ -0.98
RFX3-209ENST00000451859 FKBP15Q5T1M5 1219 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms