RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 E2F1Q01094 437 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 POU5F1Q01860 360 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 MARC1Q5VT66 337 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 SPOPLQ6IQ16 392 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ENPP7Q6UWV6 458 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CPA5Q8WXQ8 436 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 NDRG1Q92597 394 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 HPS4Q9NQG7 708 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 XPNPEP1Q9NQW7 623 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 METTL5Q9NRN9 209 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ARHGAP28Q9P2N2 729 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 SCN4AP35499 1836 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 MBLAC1A4D2B0 266 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 PRR33A8MZF0 331 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CLDN11O75508 207 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 NUDT14O95848 222 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 IVLP07476 585 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 OCA2Q04671 838 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 FOXD4Q12950 439 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CCDC38Q502W7 563 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 RHOT1Q8IXI2 618 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 DEFB106AQ8N104 65 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 FBXO39Q8N4B4 442 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 EXT2Q93063 718 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 COL26A1Q96A83 441 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 MCEEQ96PE7 176 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 EPS8L2Q9H6S3 715 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 SMYD3Q9H7B4 428 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 GPN2Q9H9Y4 310 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ABCB6Q9NP58 842 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 VPS45Q9NRW7 570 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 RSPH14Q9UHP6 348 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 VPS51Q9UID3 782 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 MYH8P13535 1937 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CTAGE15A4D2H0 777 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 KCNK3O14649 394 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CTAGE8P0CG41 777 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 GRIA2P42262 883 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 SLC5A3P53794 718 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 TMEM119Q4V9L6 283 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZC3H12AQ5D1E8 599 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ARMC12Q5T9G4 340 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 NT5DC1Q5TFE4 455 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 AGMOQ6ZNB7 445 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CTAGE6Q86UF2 777 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CTAGE4Q8IX94 777 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 VPS37AQ8NEZ2 397 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF564Q8TBZ8 553 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 NETO1Q8TDF5 533 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CAPZA3Q96KX2 299 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 GFM1Q96RP9 751 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 AGPAT1Q99943 283 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 TRIM31Q9BZY9 425 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 FOXQ1Q9C009 403 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 KCTD5Q9NXV2 234 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 MTRRQ9UBK8 725 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ATXN2Q99700 1313 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 NDUFS3O75489 264 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CTDNEP1O95476 244 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 LIG3P49916 1009 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF135P52742 658 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 DSG1Q02413 1049 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 C15orf39Q6ZRI6 1047 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CCDC186Q7Z3E2 898 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 MAATS1Q7Z4T9 603 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 SLC20A1Q8WUM9 679 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 FGF13Q92913 245 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 GPR62Q9BZJ7 368 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ATP13A3Q9H7F0 1226 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 PKD2L2Q9NZM6 624 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 LHX6Q9UPM6 363 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 RGPD2P0DJD1 1756 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CCDC189A1A4V9 331 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 SDC3O75056 442 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 PHBP35232 272 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 DGKQP52824 942 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 HNRNPKP61978 463 aaKnown RBP eCLIP5.76□□□□□ -1.492e-6■■■■■ 27.5
CDC42BPA-209ENST00000448940 IMPG1Q17R60 797 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 RALGPS2Q86X27 583 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 TMEM126BQ8IUX1 230 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ABCA7Q8IZY2 2146 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 PPFIBP2Q8ND30 876 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF507Q8TCN5 953 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 KCNB2Q92953 911 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 RNF25Q96BH1 459 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 SGSM3Q96HU1 749 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAM167BQ9BTA0 163 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 TRIM55Q9BYV6 548 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 TM6SF2Q9BZW4 377 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 TLK1Q9UKI8 766 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 DNPEPQ9ULA0 475 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 UTP11Q9Y3A2 253 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 COL6A6A6NMZ7 2263 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 SNED1Q8TER0 1413 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ARHGAP6O43182 974 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 LSM8O95777 96 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 IFNA8P32881 189 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 EML3Q32P44 896 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 CPLX4Q7Z7G2 160 aa5.76□□□□□ -1.49
CDC42BPA-209ENST00000448940 ADAM32Q8TC27 787 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms