RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	ZNF286B	P0CG31	522 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	TCF4	P15884	667 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ZNF16	P17020	682 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	KRT15	P19012	456 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	TFE3	P19532	575 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ALDH3A1	P30838	453 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	PTPN9	P43378	593 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ACADSB	P45954	432 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ATP5O	P48047	213 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	NDST1	P52848	882 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CDH6	P55285	790 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CDH8	P55286	799 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	SLC8A3	P57103	927 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	KRTAP10-2	P60368	255 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	DYNLT1	P63172	113 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	SLC6A3	Q01959	620 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	TEK	Q02763	1124 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	RNASEL	Q05823	741 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	PDIA2	Q13087	525 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ACVR2B	Q13705	512 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	GRB14	Q14449	540 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	SPARCL1	Q14515	664 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	NOMO1	Q15155	1222 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CCL15	Q16663	113 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	FAM110C	Q1W6H9	321 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	GOLGA7B	Q2TAP0	167 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ATP13A4	Q4VNC1	1196 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CCDC38	Q502W7	563 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	LGSN	Q5TDP6	509 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	HHAT	Q5VTY9	493 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	DAB2IP	Q5VWQ8	1189 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	NUGGC	Q68CJ6	796 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ARHGAP17	Q68EM7	881 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CYP4F22	Q6NT55	531 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	DARS2	Q6PI48	645 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	VSTM1	Q6UX27	236 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	RGS9BP	Q6ZS82	235 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	MOB2	Q70IA6	237 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	BZW1	Q7L1Q6	419 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ARC	Q7LC44	396 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	TRPM8	Q7Z2W7	1104 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	SPATA21	Q7Z572	469 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	PLEKHH3	Q7Z736	793 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	TRABD2A	Q86V40	505 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CDR2L	Q86X02	465 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CDKL3	Q8IVW4	592 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	SUGP1	Q8IWZ8	645 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	PALM2	Q8IXS6	379 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	HACE1	Q8IYU2	909 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	KIAA0319L	Q8IZA0	1049 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	JOSD2	Q8TAC2	188 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CXorf38	Q8TB03	319 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	SPATA18	Q8TC71	538 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	MGARP	Q8TDB4	240 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	RNF141	Q8WVD5	230 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	RXFP2	Q8WXD0	754 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CCT6B	Q92526	530 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	MAML1	Q92585	1016 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	HSPH1	Q92598	858 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	PRCC	Q92733	491 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	LRRC39	Q96DD0	335 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CPB2	Q96IY4	423 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ZNF668	Q96K58	619 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	SNX27	Q96L92	541 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	FRMD6	Q96NE9	622 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	TGS1	Q96RS0	853 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CYTH2	Q99418	400 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	FAM118B	Q9BPY3	351 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ELAC2	Q9BQ52	826 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ZNF670	Q9BS34	389 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	C16orf70	Q9BSU1	422 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	TMEM121	Q9BTD3	319 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CALN1	Q9BXU9	219 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	TRIM6	Q9C030	488 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	KLC2	Q9H0B6	622 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	SDCBP2	Q9H190	292 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	SNX25	Q9H3E2	840 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	TRABD	Q9H4I3	376 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ZCCHC4	Q9H5U6	513 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	GBA2	Q9HCG7	927 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	DNAJC17	Q9NVM6	304 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	HAUS2	Q9NVX0	235 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	EURL	Q9NYK6	297 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	KLHL14	Q9P2G3	628 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	EBF1	Q9UH73	591 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	PCSK1N	Q9UHG2	260 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	GPR160	Q9UJ42	338 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	TSPAN16	Q9UKR8	245 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	UBQLN1	Q9UMX0	589 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CORIN	Q9Y5Q5	1042 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ZNFX1	Q9P2E3	1918 aa	Known RBP	4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	ZSWIM8	A7E2V4	1837 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	CLUH	O75153	1309 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	NRCAM	Q92823	1304 aa		4.2	□□□□□ -1.74
PTPN12-208	ENST00000447995	SMIM35	A0A1B0GVV1	85 aa		4.19	□□□□□ -1.74
PTPN12-208	ENST00000447995	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.19	□□□□□ -1.74
PTPN12-208	ENST00000447995	GLTPD2	A6NH11	291 aa		4.19	□□□□□ -1.74
PTPN12-208	ENST00000447995	BTBD19	C9JJ37	291 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms