RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 PARP14Q460N5 1801 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.59■□□□□ 0.73
HMGA1-205ENST00000447654 KBTBD13C9JR72 458 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 VWA5AO00534 786 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 ACOT8O14734 319 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 TOM1L1O75674 476 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 MYO1DO94832 1006 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 KRT1P04264 644 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 KRT10P13645 584 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 CNTFP26441 200 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 RCVRNP35243 200 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 PTK2BQ14289 1009 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 HERC3Q15034 1050 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 PGM5Q15124 567 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 NRF1Q16656 503 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 SIGIRRQ6IA17 410 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 MFSD2AQ8NA29 543 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 ZNF280CQ8ND82 737 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 STON2Q8WXE9 905 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 NT5C1BQ96P26 610 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 CDRT15Q96T59 188 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 YME1L1Q96TA2 773 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 SPON1Q9HCB6 807 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 HMG20AQ9NP66 347 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 RLFQ13129 1914 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 DYTNA2CJ06 578 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 IDH3BO43837 385 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 KLHL41O60662 606 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 ATF7P17544 494 aaPredicted RBP19.59■□□□□ 0.73
HMGA1-205ENST00000447654 GAD2Q05329 585 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 MTMR1Q13613 665 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 TUBA3CQ13748 450 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 GALNT18Q6P9A2 607 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 PADI6Q6TGC4 694 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 PHTF2Q8N3S3 785 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 FAM47BQ8NA70 645 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 TRPM4Q8TD43 1214 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 ACMSDQ8TDX5 336 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 TRIB2Q92519 343 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 SGIP1Q9BQI5 828 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 SLC13A1Q9BZW2 595 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 THG1LQ9NWX6 298 aaKnown RBP19.59■□□□□ 0.73
HMGA1-205ENST00000447654 VPS51Q9UID3 782 aa19.59■□□□□ 0.73
HMGA1-205ENST00000447654 CLOCKO15516 846 aa19.58■□□□□ 0.72
HMGA1-205ENST00000447654 AKAP10O43572 662 aa19.58■□□□□ 0.72
HMGA1-205ENST00000447654 DCXO43602 365 aa19.58■□□□□ 0.72
HMGA1-205ENST00000447654 TMEM63AO94886 807 aa19.58■□□□□ 0.72
HMGA1-205ENST00000447654 FGF3P11487 239 aaPredicted RBP19.58■□□□□ 0.72
HMGA1-205ENST00000447654 MYCLP12524 364 aaPredicted RBP19.58■□□□□ 0.72
HMGA1-205ENST00000447654 PTPN1P18031 435 aaKnown RBP19.58■□□□□ 0.72
HMGA1-205ENST00000447654 MAP4P27816 1152 aaKnown RBP19.58■□□□□ 0.72
HMGA1-205ENST00000447654 POLR2BP30876 1174 aaKnown RBP19.58■□□□□ 0.72
HMGA1-205ENST00000447654 RPL22P35268 128 aaKnown RBP19.58■□□□□ 0.72
HMGA1-205ENST00000447654 HARS2P49590 506 aaKnown RBP19.58■□□□□ 0.72
HMGA1-205ENST00000447654 NUDT2P50583 147 aa19.58■□□□□ 0.72
HMGA1-205ENST00000447654 ARHGEF35A5YM69 484 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 NOP56O00567 594 aaKnown RBP19.57■□□□□ 0.72
HMGA1-205ENST00000447654 CCNE2O96020 404 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 MAPTP10636 758 aaKnown RBP19.57■□□□□ 0.72
HMGA1-205ENST00000447654 ACADSBP45954 432 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 BACE1P56817 501 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 PMS2P3Q13401 168 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 BTBD8Q5XKL5 378 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 DLK2Q6UY11 383 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 ANKRD13BQ86YJ7 626 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 NDUFAF2Q8N183 169 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 S100ZQ8WXG8 99 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 EFHD1Q9BUP0 239 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 SHCBP1LQ9BZQ2 653 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 NANOGQ9H9S0 305 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 POU2F3Q9UKI9 436 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 COL11A1P12107 1806 aaPredicted RBP19.57■□□□□ 0.72
HMGA1-205ENST00000447654 C1orf232A0A0U1RR37 186 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 ILVBLA1L0T0 632 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 MSI1O43347 362 aaKnown RBP19.57■□□□□ 0.72
HMGA1-205ENST00000447654 ENO2P09104 434 aaPredicted RBP19.57■□□□□ 0.72
HMGA1-205ENST00000447654 C7P10643 843 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 PTPRAP18433 802 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 MS4A2Q01362 244 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 IFITM2Q01629 132 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 CHRNEQ04844 493 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 TRAF2Q12933 501 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 MAMLD1Q13495 774 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 IFNLR1Q8IU57 520 aaPredicted RBP19.57■□□□□ 0.72
HMGA1-205ENST00000447654 DCP2Q8IU60 420 aaKnown RBP19.57■□□□□ 0.72
HMGA1-205ENST00000447654 ANKFN1Q8N957 763 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 NLGN2Q8NFZ4 835 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 TMC2Q8TDI7 906 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 RAB2BQ8WUD1 216 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 KLHL32Q96NJ5 620 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 PDCD2LQ9BRP1 358 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 C8orf4Q9NR00 106 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 SACM1LQ9NTJ5 587 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 TRAF6Q9Y4K3 522 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 CDY2AQ9Y6F7 541 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 CDY1Q9Y6F8 540 aa19.57■□□□□ 0.72
HMGA1-205ENST00000447654 NUAK1O60285 661 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 JRKO75564 520 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 NTRK1P04629 796 aa19.56■□□□□ 0.72
HMGA1-205ENST00000447654 TGM1P22735 817 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms