RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 SLC25A13Q9UJS0 675 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 USP18Q9UMW8 372 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 AP4E1Q9UPM8 1137 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 SNX10Q9Y5X0 201 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 STON1Q9Y6Q2 735 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 MYO18AQ92614 2054 aaKnown RBP11.13□□□□□ -0.63
HDAC6-211ENST00000443563 GOLGA6L3A6NEY3 463 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 AXIN1O15169 862 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 FGF10O15520 208 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-211ENST00000443563 CNTN5O94779 1100 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 LRIG2O94898 1065 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 EPHB2P29323 1055 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 ARHGAP25P42331 645 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 IL12RB1P42701 662 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 WASP42768 502 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 FNTBP49356 437 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-211ENST00000443563 NHLH1Q02575 133 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 BYSLQ13895 437 aaKnown RBP11.13□□□□□ -0.63
HDAC6-211ENST00000443563 ALFQ53S48 1182 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 TFAP2DQ7Z6R9 452 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 RASSF3Q86WH2 238 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 TXLNBQ8N3L3 684 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 SPC24Q8NBT2 197 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 SLC35G2Q8TBE7 412 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 CYB5D2Q8WUJ1 264 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 TEKT4Q8WW24 435 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 RFFLQ8WZ73 363 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 CALR3Q96L12 384 aaKnown RBP11.13□□□□□ -0.63
HDAC6-211ENST00000443563 ACOX2Q99424 681 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 BAG1Q99933 345 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-211ENST00000443563 FEM1AQ9BSK4 669 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 C2orf49Q9BVC5 232 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-211ENST00000443563 PACSIN1Q9BY11 444 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 TMEM245Q9H330 911 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 ZDHHC4Q9NPG8 344 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 TMEM248Q9NWD8 314 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 C2orf42Q9NWW7 574 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 MPP6Q9NZW5 540 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 BCCIPQ9P287 314 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDAC6-211ENST00000443563 RAPGEFL1Q9UHV5 662 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 VPS28Q9UK41 221 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 INTS6Q9UL03 887 aaKnown RBP11.13□□□□□ -0.63
HDAC6-211ENST00000443563 HCN2Q9UL51 889 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 ERVW-1Q9UQF0 538 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 MUC6Q6W4X9 2439 aa11.13□□□□□ -0.63
HDAC6-211ENST00000443563 CXorf51AA0A1B0GTR3 108 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 TCRBV21S2A2A0A5A6 115 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 ANTXRLA6NF34 631 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 FAM72CH0Y354 149 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 DAPK3O43293 454 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 CREB3O43889 395 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 LILRB5O75023 590 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 MTA2O94776 668 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 PROSCO94903 275 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 NDUFA10O95299 355 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 EPHX1P07099 455 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 MZF1P28698 734 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-211ENST00000443563 HOXC13P31276 330 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 MAN1A1P33908 653 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 SSR1P43307 286 aaKnown RBP11.12□□□□□ -0.63
HDAC6-211ENST00000443563 IRAK1P51617 712 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 TPI1P60174 286 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 SEMA3BQ13214 749 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 TCEAL1Q15170 157 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 USP39Q53GS9 565 aaKnown RBP11.12□□□□□ -0.63
HDAC6-211ENST00000443563 FAM72AQ5TYM5 149 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 HEATR6Q6AI08 1181 aaKnown RBP11.12□□□□□ -0.63
HDAC6-211ENST00000443563 FAM72DQ6L9T8 149 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 C11orf74Q86VG3 221 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 FAM72BQ86X60 149 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 APCDD1Q8J025 514 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 PYROXD2Q8N2H3 581 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 PGBD3Q8N328 593 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 ARFGAP1Q8N6T3 406 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 SORCS1Q8WY21 1168 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 SNRNP25Q9BV90 132 aaKnown RBP11.12□□□□□ -0.63
HDAC6-211ENST00000443563 MAGEH1Q9H213 219 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 DHX35Q9H5Z1 703 aaKnown RBP11.12□□□□□ -0.63
HDAC6-211ENST00000443563 ZWILCHQ9H900 591 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 HPCAL4Q9UM19 191 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 EPN1Q9Y6I3 576 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-211ENST00000443563 CKAP5Q14008 2032 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 USP34Q70CQ2 3546 aa11.12□□□□□ -0.63
HDAC6-211ENST00000443563 NYNRINQ9P2P1 1898 aaKnown RBP11.11□□□□□ -0.63
HDAC6-211ENST00000443563 EML5Q05BV3 1969 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 CHD5Q8TDI0 1954 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 A0A1W2PQF6 199 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 TARSL2A2RTX5 802 aaKnown RBP11.11□□□□□ -0.63
HDAC6-211ENST00000443563 WASH4PA8MWX3 477 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 WASH3PC4AMC7 463 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 PROB1E7EW31 1015 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 EEF2KO00418 725 aaKnown RBP11.11□□□□□ -0.63
HDAC6-211ENST00000443563 RAMP2O60895 175 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 ARL4AP40617 200 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 HCAR3P49019 387 aa11.11□□□□□ -0.63
HDAC6-211ENST00000443563 GEMIN4P57678 1058 aaKnown RBP11.11□□□□□ -0.63
HDAC6-211ENST00000443563 YBEYP58557 167 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-211ENST00000443563 GNA12Q03113 381 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms