RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 TOR3AQ9H497 397 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 MAGEE1Q9HCI5 957 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 SLCO1B3Q9NPD5 702 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 DDX4Q9NQI0 724 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 IL20Q9NYY1 176 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 PLK2Q9NYY3 685 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ANKFY1Q9P2R3 1169 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ASIC3Q9UHC3 531 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 MUTYHQ9UIF7 546 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ANAPC5Q9UJX4 755 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 PPM1HQ9ULR3 514 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ERGIC3Q9Y282 383 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 PMF1-BGLAPU3KQ54 211 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 RBBP6Q7Z6E9 1792 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 MON2Q7Z3U7 1717 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 MAST4O15021 2626 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 MYH8P13535 1937 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ARHGEF37A1IGU5 675 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 DCDC2BA2VCK2 349 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 H3BNX3 289 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 SMIM22K7EJ46 135 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ALOX15BO15296 676 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 TLR3O15455 904 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 RGS5O15539 181 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 GDF9O60383 454 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 CCNT2O60583 730 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 GFRA3O60609 400 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 LPXNO60711 386 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 SNAP29O95721 258 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 OAS1P00973 400 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 APOA1P02647 267 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 FGGP02679 453 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 PLEKP08567 350 aaPredicted RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 KRT19P08727 400 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 THRAP10827 490 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 POU2F1P14859 743 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 NELFEP18615 380 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 CTNNB1P35222 781 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 RPL35P42766 123 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 TM4SF4P48230 202 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 RPS3AP61247 264 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 PUDPQ08623 228 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 OVGP1Q12889 678 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 TOP3AQ13472 1001 aaPredicted RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 DNASE1L3Q13609 305 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 MAPRE1Q15691 268 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 Q3ZCU0 254 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 TNFAIP8L3Q5GJ75 292 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 KLHDC7AQ5VTJ3 777 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 GPR107Q5VW38 600 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ALG1LQ6GMV1 187 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 PDXDC2PQ6P474 469 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 PAOXQ6QHF9 649 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 UGT2A3Q6UWM9 527 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 RNF207Q6ZRF8 634 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ZNF572Q7Z3I7 529 aaPredicted RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 KCTD20Q7Z5Y7 419 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 SETD3Q86TU7 594 aaPredicted RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 GJD3Q8N144 294 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 AHI1Q8N157 1196 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 CADM2Q8N3J6 435 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 CARNMT1Q8N4J0 409 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 MTMR14Q8NCE2 650 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 SHCBP1Q8NEM2 672 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 TTLQ8NG68 377 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 FBXO25Q8TCJ0 367 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ZNF507Q8TCN5 953 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 SYMPKQ92797 1274 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 COPS5Q92905 334 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 C12orf43Q96C57 262 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 HEXIM2Q96MH2 286 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 DACH2Q96NX9 599 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 DNAJC7Q99615 494 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 SENP7Q9BQF6 1050 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 TUBGCP2Q9BSJ2 902 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 OR2B2Q9GZK3 357 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 CDH19Q9H159 772 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 SEMA4AQ9H3S1 761 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ALG13Q9NP73 1137 aaKnown RBP2.84□□□□□ -1.96
LIG4-203ENST00000442234 RIC8AQ9NPQ8 531 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 VPS45Q9NRW7 570 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ARL8BQ9NVJ2 186 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 NCKIPSDQ9NZQ3 722 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 LRFN2Q9ULH4 789 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 PRR12Q9ULL5 1215 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 PCDHA12Q9UN75 941 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 MYRFQ9Y2G1 1151 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ST14Q9Y5Y6 855 aa2.84□□□□□ -1.96
LIG4-203ENST00000442234 ABCC6O95255 1503 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 DNAJC13O75165 2243 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MYH7P12883 1935 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 ADGRA3Q8IWK6 1321 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MYO3BQ8WXR4 1341 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 TLN1Q9Y490 2541 aaKnown RBP2.83□□□□□ -1.96
LIG4-203ENST00000442234 A0A0D9SFI3 127 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 A0A1W2PPW3 197 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 MEI4A8MW99 385 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 I3L521 148 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 hCG_2039718K7EN88 272 aa2.83□□□□□ -1.96
LIG4-203ENST00000442234 FOXP2O15409 715 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms