RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 CWF19L1Q69YN2 538 aaKnown RBP13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 TAPT1Q6NXT6 567 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 MAMDC4Q6UXC1 1216 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 SNX32Q86XE0 403 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 TRIM42Q8IWZ5 723 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 EDEM1Q92611 657 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 SCYL1Q96KG9 808 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 PTPN18Q99952 460 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 MMADHCQ9H3L0 296 aaPredicted RBP13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 MROH8Q9H579 483 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 NMRK2Q9NPI5 230 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 ANLNQ9NQW6 1124 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 IARS2Q9NSE4 1012 aaKnown RBP13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 SNUPNO95149 360 aaKnown RBP13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 HDCP19113 662 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 RAB27AP51159 221 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 ABCE1P61221 599 aaKnown RBP13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 WASHC5Q12768 1159 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 SDCCAG8Q86SQ7 713 aaPredicted RBP13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 RNF135Q8IUD6 432 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 CCNYL1Q8N7R7 359 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 GPRC5AQ8NFJ5 357 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 CDKL2Q92772 493 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 CNBD2Q96M20 576 aa13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 SUDS3Q9H7L9 328 aaPredicted RBP13.43□□□□□ -0.26
SLC48A1-201ENST00000442218 A0A096LPK6 155 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 A0A0A0MRY4 1105 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 FGFR3P22607 806 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 CST9Q5W186 159 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 FSTL4Q6MZW2 842 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 CATSPER4Q7RTX7 472 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 PLPPR4Q7Z2D5 763 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 TTC16Q8NEE8 873 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 TMA16Q96EY4 203 aaKnown RBP13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 IFT43Q96FT9 208 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 SPATA13Q96N96 652 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 ZNF670Q9BS34 389 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 C16orf70Q9BSU1 422 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 RHOBTB2Q9BYZ6 727 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 SEMA6AQ9H2E6 1030 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 COPS7BQ9H9Q2 264 aaPredicted RBP13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 PDE4DIPQ5VU43 2346 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 USP34Q70CQ2 3546 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 AHCYL1O43865 530 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 SERPINE1P05121 402 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 TSPAN8P19075 237 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 PIGZQ86VD9 579 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 SSX2IPQ9Y2D8 614 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 ANK1P16157 1881 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 CLGNO14967 610 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 GLRA3O75311 464 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 GCATO75600 419 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 SMPD1P17405 629 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 MED21Q13503 144 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 MTHFD1LQ6UB35 978 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 LAYNQ6UX15 382 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 C2orf69Q8N8R5 385 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 TDRD5Q8NAT2 981 aaKnown RBP13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 SLC7A14Q8TBB6 771 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 ZFP42Q96MM3 310 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 QKIQ96PU8 341 aaKnown RBP eCLIP13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 CDRT15Q96T59 188 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 TASP1Q9H6P5 420 aa13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 C20orf96Q9NUD7 363 aaPredicted RBP13.42□□□□□ -0.26
SLC48A1-201ENST00000442218 NEMP2A6NFY4 417 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 I6L893 689 aaPredicted RBP13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 DYNC1LI2O43237 492 aaPredicted RBP13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 COX4I1P13073 169 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 HOXA11P31270 313 aaPredicted RBP13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 GNL1P36915 607 aaPredicted RBP13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 MAGEA3P43357 314 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 PLK1P53350 603 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 NAGLUP54802 743 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 SOX4Q06945 474 aaPredicted RBP13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 ACAP1Q15027 740 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 PAN2Q504Q3 1202 aaKnown RBP13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 RNF139Q8WU17 664 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 CERS2Q96G23 380 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 ANKRD27Q96NW4 1050 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 APBA2Q99767 749 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 SLC4A5Q9BY07 1137 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 CYP3A43Q9HB55 503 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 SLC4A7Q9Y6M7 1214 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 SHROOM3Q8TF72 1996 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 RECQL4O94761 1208 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 CSPG5O95196 566 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 SNAI1O95863 264 aaPredicted RBP13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 MCF2P10911 925 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 XRCC1P18887 633 aaPredicted RBP13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 CXCR3P49682 368 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 MAP3K7CLP57077 242 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 NIPAL4Q0D2K0 466 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 CTBP1Q13363 440 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 RBBP5Q15291 538 aaKnown RBP13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 GRIK4Q16099 956 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 DPYSL2Q16555 572 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 SPRYD7Q5W111 196 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 OTOP3Q7RTS5 596 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 TMEM110Q86TL2 294 aa13.41□□□□□ -0.26
SLC48A1-201ENST00000442218 GALNT15Q8N3T1 639 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms