RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 RNF43Q68DV7 783 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 PHF13Q86YI8 300 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 CCDC197Q8NCU1 140 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 ADAM32Q8TC27 787 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 FOXQ1Q9C009 403 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 ABCC13Q9NSE7 274 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 DONSONQ9NYP3 566 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 M0QYT0 321 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 LTFP02788 710 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 POLR2EP19388 210 aaKnown RBP7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 COL9A1P20849 921 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 NOMO3P69849 1222 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 MAMLD1Q13495 774 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 BSPRYQ5W0U4 402 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 TRIM68Q6AZZ1 485 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 LRRTM3Q86VH5 581 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 MFN1Q8IWA4 741 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 SCUBE3Q8IX30 993 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 HMGB4Q8WW32 186 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 ATG4AQ8WYN0 398 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 MOSPD1Q9UJG1 213 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 NCKAP1Q9Y2A7 1128 aa7.59□□□□□ -1.19
CDC42BPA-208ENST00000442054 RALGAPA2Q2PPJ7 1873 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 GOLGA6L10A0A0M3HER8 536 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 TMEM120BA0PK00 339 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 RASGRF2O14827 1237 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 PRPF4O43172 522 aaKnown RBP eCLIP7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 CREB3O43889 395 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 PROSCO94903 275 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 UBOX5O94941 541 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 GNAZP19086 355 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 SKIV2L2P42285 1042 aaKnown RBP7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 PXNP49023 591 aaPredicted RBP7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 ITGA8P53708 1063 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 RABGAP1LQ5R372 815 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 NUGGCQ68CJ6 796 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 IL31Q6EBC2 164 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 SMYD5Q6GMV2 418 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 CCDC121Q6ZUS5 278 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 PRUNE1Q86TP1 453 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZNF677Q86XU0 584 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 ARFGAP1Q8N6T3 406 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZNF653Q96CK0 615 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 SNF8Q96H20 258 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 SPACA7Q96KW9 195 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 B3GNT5Q9BYG0 378 aa7.59□□□□□ -1.2
CDC42BPA-208ENST00000442054 SPOPO43791 374 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 TBX18O95935 607 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 PDGFRAP16234 1089 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 GM2AP17900 193 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 IGFBP6P24592 240 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 CDH5P33151 784 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 LTBRP36941 435 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 CCNG2Q16589 344 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 HADHQ16836 314 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 PPP6R3Q5H9R7 873 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 SPDYAQ5MJ70 313 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 TRMT11Q7Z4G4 463 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 CROCCP2Q86T23 111 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 CCDC50Q8IVM0 306 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 WDTC1Q8N5D0 677 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 SHKBP1Q8TBC3 707 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 C1orf54Q8WWF1 131 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 SERPINB11Q96P15 392 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 WDCPQ9H6R7 721 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 NOD2Q9HC29 1040 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 CRTAC1Q9NQ79 661 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 FAM86C1Q9NVL1 165 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 IPO11Q9UI26 975 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 TSC2P49815 1807 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 TRAFD1O14545 582 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 PSTPIP1O43586 416 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 PRPSAP2O60256 369 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 MICAL2O94851 1124 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 KIAA0754O94854 1291 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 POU3F3P20264 500 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 ARL4AP40617 200 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 SLC1A1P43005 524 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 MAGEA11P43364 429 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 SOX9P48436 509 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 YWHAZP63104 245 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 OGDHQ02218 1023 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 CCDC38Q502W7 563 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 USP39Q53GS9 565 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 STXBP5Q5T5C0 1151 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 RSPO2Q6UXX9 243 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZCCHC9Q8N567 271 aaKnown RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 ZNF606Q8WXB4 792 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 PIEZO1Q92508 2521 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 EDAQ92838 391 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 C8orf48Q96LL4 319 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 PLAC1Q9HBJ0 212 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 VPS28Q9UK41 221 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 NAALADL1Q9UQQ1 740 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 MEI4A8MW99 385 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 RGS16O15492 202 aaPredicted RBP7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 ENDOD1O94919 500 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 ECEL1O95672 775 aa7.58□□□□□ -1.2
CDC42BPA-208ENST00000442054 CYP11A1P05108 521 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms