RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 MAGEC1O60732 1142 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 FBXO21O94952 628 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 TBXAS1P24557 533 aaPredicted RBP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 CD27P26842 260 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 ADORA2BP29275 332 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 GGCXP38435 758 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 CCT8P50990 548 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 CDR1P51861 262 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 COPAP53621 1224 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 OXCT1P55809 520 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 YWHAGP61981 247 aaKnown RBP eCLIP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 SNX1Q13596 522 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 SLC45A4Q5BKX6 768 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 ARMC3Q5W041 872 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 NUGGCQ68CJ6 796 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 KIAA1211LQ6NV74 962 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 SCARA5Q6ZMJ2 495 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 TMPRSS12Q86WS5 348 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 MIB1Q86YT6 1006 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 VSTM4Q8IW00 320 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 SFTPA1Q8IWL2 248 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 FAM186BQ8IYM0 893 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 KIAA0895Q8NCT3 520 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 FBXL13Q8NEE6 735 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 TMEM176AQ96HP8 235 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 TMEM245Q9H330 911 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 CNGB3Q9NQW8 809 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 TM7SF3Q9NS93 570 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 FANCLQ9NW38 375 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 CACNA2D2Q9NY47 1150 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 ADAMTS1Q9UHI8 967 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 AGO1Q9UL18 857 aaKnown RBP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 FZD4Q9ULV1 537 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 COQ4Q9Y3A0 265 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 ATXN2Q99700 1313 aaKnown RBP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 SPTBN2O15020 2390 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 TARSL2A2RTX5 802 aaKnown RBP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 TMCO5BA8MYB1 307 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 EIF3HO15372 352 aaKnown RBP eCLIP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 TSPAN3O60637 253 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 RNASEH1O60930 286 aaKnown RBP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 RASSF9O75901 435 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 BEST1O76090 585 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 ZBED1O96006 694 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 SRPRAP08240 638 aaKnown RBP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 EEF1GP26641 437 aaKnown RBP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 IL12RB1P42701 662 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 CCR5P51681 352 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 LRRC63Q05C16 580 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 C1QBPQ07021 282 aaKnown RBP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 SCAPQ12770 1279 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 STK4Q13043 487 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 ZNF234Q14588 700 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 C1orf220Q5T0J3 134 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 ADGRF1Q5T601 910 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 ZNF776Q68DI1 518 aaPredicted RBP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 TPGS1Q6ZTW0 290 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 CHCHD4Q8N4Q1 142 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 CEP112Q8N8E3 955 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 ARMC2Q8NEN0 867 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 RNF139Q8WU17 664 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 WBP2Q969T9 261 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 TTC17Q96AE7 1141 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 FAM84AQ96KN4 292 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 HEXIM2Q96MH2 286 aaKnown RBP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 ACOX2Q99424 681 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 SH3GL3Q99963 347 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 GPR174Q9BXC1 333 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 GAREM1Q9H706 876 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 VIPAS39Q9H9C1 493 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 ERVMER34-1Q9H9K5 563 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 NMUR1Q9HB89 426 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 OSER1Q9NX31 292 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 UTP6Q9NYH9 597 aaKnown RBP6.23□□□□□ -1.41
PTPRR-204ENST00000440835 HESX1Q9UBX0 185 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 RASAL2Q9UJF2 1139 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 CHD8Q9HCK8 2581 aa6.23□□□□□ -1.41
PTPRR-204ENST00000440835 NYNRINQ9P2P1 1898 aaKnown RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 TYW5A2RUC4 315 aaKnown RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 GOLGA6L9A6NEM1 432 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 PAEPP09466 180 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 EPB41P11171 864 aaKnown RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 BMP6P22004 513 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 NR2F2P24468 414 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 CASP1P29466 404 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 GCKP35557 465 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 PRCPP42785 496 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 MAGEA8P43361 318 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 CASP4P49662 377 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 STX17P56962 302 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 BST2Q10589 180 aaKnown RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 SLC12A1Q13621 1099 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 TRIM14Q14142 442 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 SMAD1Q15797 465 aaKnown RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 HLA-BQ31612 363 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 SERPINA13PQ6UXR4 307 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 GPRIN1Q7Z2K8 1008 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 PCGF5Q86SE9 256 aa6.22□□□□□ -1.41
PTPRR-204ENST00000440835 CCDC117Q8IWD4 279 aaPredicted RBP6.22□□□□□ -1.41
PTPRR-204ENST00000440835 FRMD1Q8N878 549 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms