RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CELF1Q92879 486 aaKnown RBP3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 TRMT61AQ96FX7 289 aaKnown RBP3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 LTV1Q96GA3 475 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 RMDN3Q96TC7 470 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 SENP7Q9BQF6 1050 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 SORBS1Q9BX66 1292 aaKnown RBP3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 NECTIN3Q9NQS3 549 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 CA14Q9ULX7 337 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 VPS4AQ9UN37 437 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 DTNAQ9Y4J8 743 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 PCDHB2Q9Y5E7 798 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 HS3ST3B1Q9Y662 390 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 FMN1Q68DA7 1419 aa3.77□□□□□ -1.81
HMGB3P12-201ENST00000438745 GLI3P10071 1580 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 RGPD1P0DJD0 1748 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 SHANK3Q9BYB0 1731 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 LOC102724159A0A0B4J2E5 919 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 PNMA6EA0A0J9YXQ4 647 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 GXYLT2A0PJZ3 443 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 SLC22A23A1A5C7 686 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 TTC34A8MYJ7 566 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 ACKR2O00590 384 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 PCDH17O14917 1159 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 INSIG1O15503 277 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 TLX3O43711 291 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 USP12O75317 370 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 EIF3JO75822 258 aaKnown RBP3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 NTSR2O95665 410 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 ENO1P06733 434 aaKnown RBP3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 NPPBP16860 134 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 ME1P48163 572 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 AGTR2P50052 363 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 ALDH18A1P54886 795 aaKnown RBP3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 DMWDQ09019 674 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 MTX1Q13505 466 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 BFSP2Q13515 415 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 PTK2BQ14289 1009 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 KRT72Q14CN4 511 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 PWP2Q15269 919 aaKnown RBP3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 ZRSR2Q15696 482 aaKnown RBP3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 ZNF260Q3ZCT1 412 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 ARL6IP4Q66PJ3 421 aaKnown RBP3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 SULT6B1Q6IMI4 303 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 RINT1Q6NUQ1 792 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 FAM57BQ71RH2 274 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 GATAD2AQ86YP4 633 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 ASB12Q8WXK4 309 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 AKAP1Q92667 903 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 WACQ9BTA9 647 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 PAGR1Q9BTK6 254 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 MAGEH1Q9H213 219 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 FOXP1Q9H334 677 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 CDCP1Q9H5V8 836 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 ARL8BQ9NVJ2 186 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 PCDHGB3Q9Y5G1 929 aa3.76□□□□□ -1.81
HMGB3P12-201ENST00000438745 ERVK-7P63135 1459 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 TRBV5-3A0A0A0MS03 114 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 ZNF814B7Z6K7 855 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 SYT5O00445 386 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 TNFRSF1BP20333 461 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 NDUFS1P28331 727 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 SERPINF1P36955 418 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 STAT6P42226 847 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 CPA2P48052 419 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 POLGP54098 1239 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 SLC12A2P55011 1212 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 GRM4Q14833 912 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 BTBD16Q32M84 506 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 INO80DQ53TQ3 878 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 MSANTD2Q6P1R3 559 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 KLHL17Q6TDP4 642 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 TTC30AQ86WT1 665 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 CERS3Q8IU89 383 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 SAMD14Q8IZD0 417 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 CACNA2D3Q8IZS8 1091 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 MMP21Q8N119 569 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 ZNF548Q8NEK5 533 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 OR1N1Q8NGS0 311 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 PIGKQ92643 395 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 MSI2Q96DH6 328 aaKnown RBP3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 EIF3CQ99613 913 aaKnown RBP3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 HERPUD2Q9BSE4 406 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 KRTAP1-5Q9BYS1 174 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 MYLK2Q9H1R3 596 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 KCNK9Q9NPC2 374 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 SEMA4BQ9NPR2 832 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 FSCN3Q9NQT6 498 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 POT1Q9NUX5 634 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 TROQ12816 1431 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 DHX29Q7Z478 1369 aaKnown RBP3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 SYCP2Q9BX26 1530 aa3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 GPATCH8Q9UKJ3 1502 aaKnown RBP3.75□□□□□ -1.81
HMGB3P12-201ENST00000438745 BRWD3Q6RI45 1802 aa3.74□□□□□ -1.81
HMGB3P12-201ENST00000438745 FAM90A10PA6NDY2 464 aa3.74□□□□□ -1.81
HMGB3P12-201ENST00000438745 MYMKA6NI61 221 aa3.74□□□□□ -1.81
HMGB3P12-201ENST00000438745 TAF5LO75529 589 aa3.74□□□□□ -1.81
HMGB3P12-201ENST00000438745 TOMM70O94826 608 aa3.74□□□□□ -1.81
HMGB3P12-201ENST00000438745 OAZ2O95190 189 aa3.74□□□□□ -1.81
HMGB3P12-201ENST00000438745 TOMM40O96008 361 aa3.74□□□□□ -1.81
HMGB3P12-201ENST00000438745 ANXA6P08133 673 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms