RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 GTPBP2Q9BX10 602 aaKnown RBP18.85■□□□□ 0.61
HMGN1-207ENST00000436324 RAB6CQ9H0N0 254 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 MIR1-1HGQ9H1L0 117 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 FBRSQ9HAH7 460 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 SLC6A14Q9UN76 642 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 PAXBP1Q9Y5B6 917 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 MUC22E2RYF6 1773 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-207ENST00000436324 CKAP5Q14008 2032 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 CDX4O14627 284 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-207ENST00000436324 TM4SF5O14894 197 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 SRGAP2O75044 1071 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 CLDN11O75508 207 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 IGLV3-19P01714 112 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 ACSL1P33121 698 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 HOXD12P35452 270 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 CDH4P55283 916 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 OXCT1P55809 520 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 GFPT1Q06210 699 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-207ENST00000436324 PTP4A2Q12974 167 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 C9orf64Q5T6V5 341 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 SH3PXD2AQ5TCZ1 1133 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 LRRC31Q6UY01 552 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 SNX19Q92543 992 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 NAP1L5Q96NT1 182 aaPredicted RBP18.84■□□□□ 0.61
HMGN1-207ENST00000436324 MUC3BQ9H195 1237 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 MPP6Q9NZW5 540 aa18.84■□□□□ 0.61
HMGN1-207ENST00000436324 DMXL1Q9Y485 3027 aa18.83■□□□□ 0.61
HMGN1-207ENST00000436324 EDDM13A0A1B0GTR0 161 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 RNASEH1O60930 286 aaKnown RBP18.83■□□□□ 0.6
HMGN1-207ENST00000436324 SERPINF2P08697 491 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 VAV1P15498 845 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 FERP16591 822 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 SDC4P31431 198 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 NNMTP40261 264 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 PLK1P53350 603 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 SULT2A1Q06520 285 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 IQCB1Q15051 598 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 KLHL40Q2TBA0 621 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 CCDC14Q49A88 953 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 TTC31Q49AM3 519 aaPredicted RBP18.83■□□□□ 0.6
HMGN1-207ENST00000436324 C5orf22Q49AR2 442 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 ACCSLQ4AC99 568 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 DAB2IPQ5VWQ8 1189 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 TFAP2DQ7Z6R9 452 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 MMAAQ8IVH4 418 aaKnown RBP18.83■□□□□ 0.6
HMGN1-207ENST00000436324 ZNF683Q8IZ20 524 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 STK40Q8N2I9 435 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 KDM1BQ8NB78 822 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 CADM4Q8NFZ8 388 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 ALG14Q96F25 216 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 FEM1AQ9BSK4 669 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 RSPH9Q9H1X1 276 aaPredicted RBP18.83■□□□□ 0.6
HMGN1-207ENST00000436324 C6orf106Q9H6K1 298 aaPredicted RBP18.83■□□□□ 0.6
HMGN1-207ENST00000436324 VPS28Q9UK41 221 aa18.83■□□□□ 0.6
HMGN1-207ENST00000436324 ITIH6Q6UXX5 1313 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 TNRC6BQ9UPQ9 1833 aaKnown RBP18.82■□□□□ 0.6
HMGN1-207ENST00000436324 TARSL2A2RTX5 802 aaKnown RBP18.82■□□□□ 0.6
HMGN1-207ENST00000436324 DRGXA6NNA5 263 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 METTL12A8MUP2 240 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 E9PAM4 449 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 MID1O15344 667 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 SERPINC1P01008 464 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 CALB1P05937 261 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 RHOCP08134 193 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 KRT3P12035 628 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 PSMD8P48556 350 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 ATXN3P54252 364 aaPredicted RBP18.82■□□□□ 0.6
HMGN1-207ENST00000436324 ZBTB16Q05516 673 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 ARCQ7LC44 396 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 BNIPLQ7Z465 357 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 RABEPKQ7Z6M1 372 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 PHF13Q86YI8 300 aaPredicted RBP18.82■□□□□ 0.6
HMGN1-207ENST00000436324 ZCCHC9Q8N567 271 aaKnown RBP18.82■□□□□ 0.6
HMGN1-207ENST00000436324 OR2I1PQ8NGU4 316 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 PTPRN2Q92932 1015 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 C1orf74Q96LT6 269 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 PPP1R9BQ96SB3 815 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 FAM129BQ96TA1 746 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 SELENOOQ9BVL4 669 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 BTBD1Q9H0C5 482 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 PABPC3Q9H361 631 aaKnown RBP18.82■□□□□ 0.6
HMGN1-207ENST00000436324 CBX8Q9HC52 389 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 CAPN10Q9HC96 672 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 EIF2B4Q9UI10 523 aaKnown RBP18.82■□□□□ 0.6
HMGN1-207ENST00000436324 SLC25A13Q9UJS0 675 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 NCKAP1Q9Y2A7 1128 aa18.82■□□□□ 0.6
HMGN1-207ENST00000436324 CEP192Q8TEP8 1941 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 C2CD4BA6NLJ0 364 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 ENDOD1O94919 500 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 SEMA4FO95754 770 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 CCDC172P0C7W6 258 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 GNSP15586 552 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 TNFAIP3P21580 790 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 ARID5BQ14865 1188 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 CST6Q15828 149 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 LRSAM1Q6UWE0 723 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 MON1BQ7L1V2 547 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 IRF2BP2Q7Z5L9 587 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 LUZP1Q86V48 1076 aa18.81■□□□□ 0.6
HMGN1-207ENST00000436324 BAP1Q92560 729 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms