RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 CRACR2AQ9BSW2 395 aa6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 UBE2TQ9NPD8 197 aaPredicted RBP6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 ANLNQ9NQW6 1124 aa6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 ST7Q9NRC1 585 aa6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 ASNSD1Q9NWL6 643 aa6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 FBXL12Q9NXK8 326 aa6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 DKK4Q9UBT3 224 aa6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 PCDHGC3Q9UN70 934 aa6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 APOBEC2Q9Y235 224 aaKnown RBP6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 GPSM3Q9Y4H4 160 aa6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 PCDHB9Q9Y5E1 797 aa6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 GTF3C3Q9Y5Q9 886 aa6.38□□□□□ -1.39
PNKDP1-201ENST00000435914 BPTFQ12830 3046 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 URB1O60287 2271 aaKnown RBP6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 DOCK4Q8N1I0 1966 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 A0A1B0GVM2 712 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 TCAF2A6NFQ2 919 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 THAP12O43422 761 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 MED7O43513 233 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 TNFSF14O43557 240 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 ATP9BO43861 1147 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 APOEP02649 317 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 ERBB2P04626 1255 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 KRT5P13647 590 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 C5AR1P21730 350 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 PON1P27169 355 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 SLC8A1P32418 973 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 RDXP35241 583 aaKnown RBP6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 CLCN1P35523 988 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 GRK6P43250 576 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 CCT8P50990 548 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 CCR5P51681 352 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 ADPRHP54922 357 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 ST8SIA6P61647 398 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 PPP2CBP62714 309 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 PPP2CAP67775 309 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 BECN1Q14457 450 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 ELAVL3Q14576 367 aaKnown RBP6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 TEAD4Q15561 434 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 SMAD1Q15797 465 aaKnown RBP6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 PTPN20Q4JDL3 420 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 FBXL22Q6P050 247 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 LRSAM1Q6UWE0 723 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 SLC26A9Q7LBE3 791 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 KANSL1Q7Z3B3 1105 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 BNIPLQ7Z465 357 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 CHSY1Q86X52 802 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 CIR1Q86X95 450 aaPredicted RBP6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 MARCH9Q86YJ5 346 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 ZNF683Q8IZ20 524 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 DEFB106AQ8N104 65 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 STK40Q8N2I9 435 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 ZNF397Q8NF99 534 aaPredicted RBP6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 OR2T34Q8NGX1 318 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 RHBDD1Q8TEB9 315 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 SAP25Q8TEE9 199 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 SETD7Q8WTS6 366 aaKnown RBP6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 NT5C3BQ969T7 300 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 NPY6RQ99463 290 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 ELF4Q99607 663 aaPredicted RBP6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 CDC6Q99741 560 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 TRIM62Q9BVG3 475 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 KIAA1468Q9P260 1216 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 ARHGAP20Q9P2F6 1191 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 APEX2Q9UBZ4 518 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 RWDD2AQ9UIY3 292 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 SARDHQ9UL12 918 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 TBC1D30Q9Y2I9 924 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 CHD5Q8TDI0 1954 aa6.37□□□□□ -1.39
PNKDP1-201ENST00000435914 TYW5A2RUC4 315 aaKnown RBP6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 LRRC72A6NJI9 287 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 F5H5T6 163 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 RNF103O00237 685 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 FOXN3O00409 490 aaPredicted RBP6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 CAPN9O14815 690 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 DFNA5O60443 496 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 RNASEH1O60930 286 aaKnown RBP6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 HSF2BPO75031 334 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 DAB1O75553 588 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 RNASEH2AO75792 299 aaKnown RBP6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 MOCS3O95396 460 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 ADH1BP00325 375 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 SLC2A3P11169 496 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 PDGFRAP16234 1089 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 GOT1P17174 413 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 TFE3P19532 575 aaPredicted RBP6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 CD38P28907 300 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 CCR1P32246 355 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 CDH5P33151 784 aaPredicted RBP6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 RXRGP48443 463 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 PSMD8P48556 350 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 NXPH1P58417 271 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 TAS2R38P59533 333 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 CENPCQ03188 943 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 SULT2A1Q06520 285 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 AUHQ13825 339 aaKnown RBP6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 SUZ12Q15022 739 aaKnown RBP6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 ARHGAP44Q17R89 818 aa6.36□□□□□ -1.39
PNKDP1-201ENST00000435914 EXOC3L4Q17RC7 722 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms