RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PGAM4Q8N0Y7 254 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 DCLK2Q8N568 766 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 SCYL1Q96KG9 808 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 HEXIM2Q96MH2 286 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 APBA2Q99767 749 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 GATA5Q9BWX5 397 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 OSBPL11Q9BXB4 747 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 CROCCQ5TZA2 2017 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 TRIM13O60858 407 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 E2F6O75461 281 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 PIGNO95427 931 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 FUCA1P04066 466 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 GNAO1P09471 354 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 GLDCP23378 1020 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 MCCD1P59942 119 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 CTBSQ01459 385 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 ITGADQ13349 1161 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 OLIG2Q13516 323 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 DUOXA2Q1HG44 320 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 USP41Q3LFD5 358 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 KCNT2Q6UVM3 1135 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 FIBCD1Q8N539 461 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 ACMSDQ8TDX5 336 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 CLEC4DQ8WXI8 215 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 DLG3Q92796 817 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 CXorf21Q9HAI6 301 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 IGSF9Q9P2J2 1179 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 PADI4Q9UM07 663 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 AURKCQ9UQB9 309 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 HTR3EA5X5Y0 456 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 GOLGA8TH3BQL2 631 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 MED7O43513 233 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 ADAM23O75077 832 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 JUNP05412 331 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 CCDC130P13994 396 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 GJA8P48165 433 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 NAGLUP54802 743 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 TGFB2P61812 414 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 TRAF2Q12933 501 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 HEATR6Q6AI08 1181 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 GK5Q6ZS86 529 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 CHST15Q7LFX5 561 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 GPR180Q86V85 440 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 ADAMTSL1Q8N6G6 1762 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 CCNYL1Q8N7R7 359 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 FEM1BQ9UK73 627 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 PCDHGC3Q9UN70 934 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 ABCA3Q99758 1704 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 A0A096LPK6 155 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 C1orf232A0A0U1RR37 186 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 FAM149AA5PLN7 773 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 KCNU1A8MYU2 1149 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 H0YCG3 227 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 MATN2O00339 956 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 USP12O75317 370 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 HDCP19113 662 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 CD247P20963 164 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 EPHX2P34913 555 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 PPARGP37231 505 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 GARSP41250 739 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 KPNA1P52294 538 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 NEDD8Q15843 81 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 METTL21CQ5VZV1 264 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 EGFLAMQ63HQ2 1017 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 LRRC8EQ6NSJ5 796 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 DCDC5Q6ZRR9 648 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 TMEM26Q6ZUK4 368 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 STRA8Q7Z7C7 330 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 CDAN1Q8IWY9 1227 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 LZTR1Q8N653 840 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 FNIP1Q8TF40 1166 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 BORCS5Q969J3 196 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 PDCD2LQ9BRP1 358 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 NAA50Q9GZZ1 169 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 HMGXB4Q9UGU5 601 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 SQORQ9Y6N5 450 aa11.79□□□□□ -0.52
HMGCS1-202ENST00000433297 FOCADQ5VW36 1801 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 KPNA7A9QM74 516 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 TFEBP19484 476 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 IL4RP24394 825 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 SOX11P35716 441 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 CAP2P40123 477 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 BCAP31P51572 246 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 PFKPQ01813 784 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 GNA12Q03113 381 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 FSTL1Q12841 308 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 NME3Q13232 169 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 SEPT6Q14141 434 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 ARL13AQ5H913 290 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 NANOGP8Q6NSW7 305 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 NIPA1Q7RTP0 329 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 SETD3Q86TU7 594 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 LPGAT1Q92604 370 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 PPP1R10Q96QC0 940 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 TASP1Q9H6P5 420 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 SFMBT1Q9UHJ3 866 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 SLC8A2Q9UPR5 921 aa11.78□□□□□ -0.52
HMGCS1-202ENST00000433297 RNF103-CHMP3A0A140T963 221 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms