RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 FAM228BP0C875 321 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 PABPC1P11940 636 aaKnown RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 GZMAP12544 262 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 POLR2EP19388 210 aaKnown RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 RDXP35241 583 aaKnown RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ADRA1BP35368 520 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 SCNN1AP37088 669 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 EIF4A3P38919 411 aaKnown RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 PRKCIP41743 596 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 IL12RB1P42701 662 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 CTSOP43234 321 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 IRAK1P51617 712 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 OGDHQ02218 1023 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 GFPT1Q06210 699 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 LMAN2Q12907 356 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF177Q13360 481 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 MAMLD1Q13495 774 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 CDH18Q13634 790 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF234Q14588 700 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ARL13BQ3SXY8 428 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 FNDC3BQ53EP0 1204 aaKnown RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ALFQ53S48 1182 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 PITRM1Q5JRX3 1037 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 RABGAP1LQ5R372 815 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 CCDC122Q5T0U0 273 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 HGSNATQ68CP4 663 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 SPECC1LQ69YQ0 1117 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZC3H14Q6PJT7 736 aaKnown RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 LRRC31Q6UY01 552 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 MON1BQ7L1V2 547 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 TRMT11Q7Z4G4 463 aaKnown RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ADIPOR2Q86V24 386 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 VSTM4Q8IW00 320 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 CCAR2Q8N163 923 aaKnown RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 DEPDC4Q8N2C3 294 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 CCDC185Q8N715 623 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZBTB44Q8NCP5 570 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 C3orf20Q8ND61 904 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 MDGA1Q8NFP4 955 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 OR8K1Q8NGG5 319 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 OLIG1Q8TAK6 271 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 FIBINQ8TAL6 211 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 FAM172AQ8WUF8 416 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 NELL1Q92832 810 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF653Q96CK0 615 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 RPL10LQ96L21 214 aaKnown RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 MCEEQ96PE7 176 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 PRMT1Q99873 361 aaKnown RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 HINFPQ9BQA5 517 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 SYT11Q9BT88 431 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ARHGEF38Q9NXL2 777 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 MPP6Q9NZW5 540 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 KIAA1522Q9P206 1035 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 ARHGAP20Q9P2F6 1191 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 THAP10Q9P2Z0 257 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 PCSK1NQ9UHG2 260 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 SLCO3A1Q9UIG8 710 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 PLA2G4CQ9UP65 541 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 STARD13Q9Y3M8 1113 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 PCDHGA2Q9Y5H1 932 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 BDP1A6H8Y1 2624 aa5.95□□□□□ -1.46
HMGB3P24-201ENST00000433260 TTC28Q96AY4 2481 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 FANCMQ8IYD8 2048 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 A0A1W2PQF6 199 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 TCRBV5S1A1TA0A578 114 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 CREB3O43889 395 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 SYNCRIPO60506 623 aaKnown RBP5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 GFRA3O60609 400 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 LILRB5O75023 590 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 RPP40O75818 363 aaKnown RBP5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 ALDH1A2O94788 518 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 ENDOD1O94919 500 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 MOCS3O95396 460 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 LMNAP02545 664 aaKnown RBP5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 ATP5BP06576 529 aaKnown RBP5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 GABRG2P18507 467 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 PRKCHP24723 683 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 PSMA2P25787 234 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 MZF1P28698 734 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 CSKP41240 450 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 PTPN9P43378 593 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF143P52747 638 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 HDAC4P56524 1084 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 CCDC6Q16204 474 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 FUT11Q495W5 492 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 ACCSLQ4AC99 568 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 USP39Q53GS9 565 aaKnown RBP5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 BRMS1LQ5PSV4 323 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 MPP7Q5T2T1 576 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 DAB2IPQ5VWQ8 1189 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 RNF219Q5W0B1 726 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 RWDD4Q6NW29 188 aaKnown RBP5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 SERPINA13PQ6UXR4 307 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 BNIPLQ7Z465 357 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 TFAP2DQ7Z6R9 452 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 KIAA0907Q7Z7F0 614 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 SLFN11Q7Z7L1 901 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 KBTBD6Q86V97 674 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 VPS36Q86VN1 386 aa5.94□□□□□ -1.46
HMGB3P24-201ENST00000433260 WDR5BQ86VZ2 330 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms