RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 SIRT4Q9Y6E7 314 aaPredicted RBP1.4□□□□□ -2.19
HMGN1P33-201ENST00000432945 CDY1Q9Y6F8 540 aa1.4□□□□□ -2.19
HMGN1P33-201ENST00000432945 PHRF1Q9P1Y6 1649 aaKnown RBP1.4□□□□□ -2.19
HMGN1P33-201ENST00000432945 SHROOM3Q8TF72 1996 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 FNDC1Q4ZHG4 1894 aaPredicted RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 POLA1P09884 1462 aaPredicted RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 PXDNQ92626 1479 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 A0A088AWK7 358 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 E2F8A0AVK6 867 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 GAGE12JA6NER3 117 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 C2CD4BA6NLJ0 364 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 H3BML4 177 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 GTPBP1O00178 669 aaKnown RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 FYB1O15117 783 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 LDB3O75112 727 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 RASSF9O75901 435 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 PIAS2O75928 621 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 NDUFB8O95169 186 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 HOXC6P09630 235 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 MATN1P21941 496 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 RBL1P28749 1068 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 UQCRC1P31930 480 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 POLD2P49005 469 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 GATMP50440 423 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 ARFIP2P53365 341 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 HILS1P60008 231 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 EIF4A1P60842 406 aaKnown RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 YPEL5P62699 121 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 PPATQ06203 517 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 DSC1Q08554 894 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 MTA1Q13330 715 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 SLC14A1Q13336 389 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 NFATC4Q14934 902 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 KPNB1Q14974 876 aaKnown RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 CNGA3Q16281 694 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 LY6KQ17RY6 165 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 EARS2Q5JPH6 523 aaKnown RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 NADSYN1Q6IA69 706 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 CUZD1Q86UP6 607 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 NR2C2APQ86WQ0 139 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 ZNF280BQ86YH2 543 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 GRAMD1CQ8IYS0 662 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 CHPFQ8IZ52 775 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 ADGRF4Q8IZF3 695 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 PELI3Q8N2H9 469 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 SDR16C5Q8N3Y7 309 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 RBMXL3Q8N7X1 1067 aaKnown RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 FAM47BQ8NA70 645 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 B4GALNT2Q8NHY0 566 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 DNAJB14Q8TBM8 379 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 DNASE2BQ8WZ79 361 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 RAPGEF4Q8WZA2 1011 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 TRMT61AQ96FX7 289 aaKnown RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 CLMNQ96JQ2 1002 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 FCRL5Q96RD9 977 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 TRIM54Q9BYV2 358 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 CDT1Q9H211 546 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 TCF7L1Q9HCS4 588 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 DDX56Q9NY93 547 aaKnown RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 USP35Q9P2H5 1018 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 DNAJB11Q9UBS4 358 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 ERRFI1Q9UJM3 462 aaPredicted RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 HDAC9Q9UKV0 1011 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 AGO2Q9UKV8 859 aaKnown RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 FZD4Q9ULV1 537 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 MYO6Q9UM54 1294 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 PCDHA7Q9UN72 937 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 PCDHA12Q9UN75 941 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 SLC8A2Q9UPR5 921 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 ANKRD6Q9Y2G4 727 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 LUC7L2Q9Y383 392 aaKnown RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 KNDC1Q76NI1 1749 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 TTBK1Q5TCY1 1321 aaPredicted RBP1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 ZNF831Q5JPB2 1677 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 NHSQ6T4R5 1651 aa1.39□□□□□ -2.19
HMGN1P33-201ENST00000432945 CCDC18Q5T9S5 1454 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 PLEKHH2Q8IVE3 1493 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 KIF15Q9NS87 1388 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 LAMC1P11047 1609 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 TRPM7Q96QT4 1865 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 KIR2DS5A0A0G2JLQ3 304 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 RPS10-NUDT3A0A1W2PQS6 291 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 ISM1B1AKI9 464 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 KDM4EB2RXH2 506 aaPredicted RBP1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 KIR2DS3K7RE56 304 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 SPRY2O43597 315 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 DCXO43602 365 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 KATNA1O75449 491 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 EPN2O95208 641 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 ZRANB2O95218 330 aaKnown RBP eCLIP1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 SGPL1O95470 568 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 VNN1O95497 513 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 TMEM225BP0DP42 221 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 PKMP14618 531 aaKnown RBP1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 TPH1P17752 444 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 MMP8P22894 467 aa1.38□□□□□ -2.19
HMGN1P33-201ENST00000432945 DUSP1P28562 367 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms